Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   V6T26_RS02050 Genome accession   NZ_CP145858
Coordinates   386160..386891 (+) Length   243 a.a.
NCBI ID   WP_270616748.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS11     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 381160..391891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T26_RS02035 (V6T26_02035) - 382627..384732 (+) 2106 WP_070579628.1 AAA family ATPase -
  V6T26_RS02040 (V6T26_02040) - 385380..385679 (-) 300 WP_014634939.1 hypothetical protein -
  V6T26_RS02045 (V6T26_02045) - 385676..386095 (-) 420 WP_037599159.1 HIT family protein -
  V6T26_RS02050 (V6T26_02050) pptA 386160..386891 (+) 732 WP_270616748.1 ABC transporter ATP-binding protein Regulator
  V6T26_RS02055 (V6T26_02055) pptB 386891..387925 (+) 1035 WP_410541530.1 ABC transporter permease Regulator
  V6T26_RS02060 (V6T26_02060) ccrZ 387983..388774 (+) 792 WP_002884270.1 cell cycle regulator CcrZ -
  V6T26_RS02065 (V6T26_02065) trmB 388784..389425 (+) 642 WP_151404302.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  V6T26_RS02075 (V6T26_02075) - 389642..390823 (-) 1182 WP_410541348.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26842.06 Da        Isoelectric Point: 4.4174

>NTDB_id=940233 V6T26_RS02050 WP_270616748.1 386160..386891(+) (pptA) [Streptococcus salivarius strain KSS11]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=940233 V6T26_RS02050 WP_270616748.1 386160..386891(+) (pptA) [Streptococcus salivarius strain KSS11]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGCCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGTTTGGATCCCTTGGCAATCTCCGACCTAATTGAGCTTTTGGCTGAGGAAAAAGCGAATGGTAAGGCGATTCTCAT
GTCGACTCACGTTTTGGATTCGGCTGAAAAAATGTGTGACCGTTTTGTCATCTTGCATCACGGTCAAGTCTTGGCACAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCCAGTCTTAACGATATTTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

99.177

100

0.992
  pptA Streptococcus thermophilus LMD-9

97.942

100

0.979