Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V6T01_RS10205 Genome accession   NZ_CP145856
Coordinates   2158863..2159630 (+) Length   255 a.a.
NCBI ID   WP_060972105.1    Uniprot ID   A0A6A8UDL8
Organism   Streptococcus salivarius strain KSS1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2153863..2164630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS10190 (V6T01_10165) - 2156177..2156860 (-) 684 WP_002892206.1 YoaK family protein -
  V6T01_RS10195 (V6T01_10170) rlmH 2156877..2157356 (-) 480 WP_107373293.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6T01_RS10200 (V6T01_10175) htrA 2157562..2158797 (+) 1236 WP_060972104.1 S1C family serine protease Regulator
  V6T01_RS10205 (V6T01_10180) spo0J 2158863..2159630 (+) 768 WP_060972105.1 ParB/RepB/Spo0J family partition protein Regulator
  V6T01_RS10210 (V6T01_10185) dnaA 2159868..2161232 (+) 1365 WP_037599382.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29365.79 Da        Isoelectric Point: 9.4081

>NTDB_id=940215 V6T01_RS10205 WP_060972105.1 2158863..2159630(+) (spo0J) [Streptococcus salivarius strain KSS1]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEDTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=940215 V6T01_RS10205 WP_060972105.1 2158863..2159630(+) (spo0J) [Streptococcus salivarius strain KSS1]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTGAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTCTCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCAAGACCCT
ATATCAGTAACGCTCTTAGACTCCTCCAACTTCCCAAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGATACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACATAAAAGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAGGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6A8UDL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.431

100

0.584