Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   V6T01_RS01085 Genome accession   NZ_CP145856
Coordinates   197011..198273 (+) Length   420 a.a.
NCBI ID   WP_014633828.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 192011..203273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS01045 - 192242..192343 (+) 102 WP_125411869.1 transaldolase family protein -
  V6T01_RS01050 (V6T01_01045) - 192385..192678 (+) 294 WP_155124062.1 transaldolase family protein -
  V6T01_RS01055 (V6T01_01050) - 193171..193500 (-) 330 Protein_167 transposase -
  V6T01_RS01060 (V6T01_01055) - 193545..193973 (+) 429 Protein_168 ATP-binding cassette domain-containing protein -
  V6T01_RS01065 (V6T01_01060) - 194129..194845 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  V6T01_RS01070 (V6T01_01065) - 194971..195309 (+) 339 WP_073686593.1 preprotein translocase subunit YajC -
  V6T01_RS01075 (V6T01_01070) - 195438..196187 (+) 750 WP_002886457.1 isoprenyl transferase -
  V6T01_RS01080 (V6T01_01075) - 196200..196994 (+) 795 WP_179968621.1 phosphatidate cytidylyltransferase -
  V6T01_RS01085 (V6T01_01080) eeP 197011..198273 (+) 1263 WP_014633828.1 M50 family metallopeptidase Regulator
  V6T01_RS01090 (V6T01_01085) - 198344..200206 (+) 1863 WP_129852187.1 proline--tRNA ligase -
  V6T01_RS01095 (V6T01_01090) - 200684..202624 (+) 1941 WP_002883690.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45838.19 Da        Isoelectric Point: 5.8010

>NTDB_id=940159 V6T01_RS01085 WP_014633828.1 197011..198273(+) (eeP) [Streptococcus salivarius strain KSS1]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQIDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETISVKPQENQGSYFLGVSPALKTSLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=940159 V6T01_RS01085 WP_014633828.1 197011..198273(+) (eeP) [Streptococcus salivarius strain KSS1]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGCTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATCCGTATCCTCCCTTTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGATTGATCAGAC
GGCTTTACCTATGAACGTCACTGCCTATGATTTGGAGGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGAGGTGTTCAAGATACATCGACCAACCGTATCCAGGTAGCCGATGGAGGCGCTGCTC
AGGTGGCAGGCTTGAAAAATGGTGATGCCATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AACAATCTCTGTTAAACCTCAGGAGAACCAAGGTAGCTATTTTTTGGGTGTTTCTCCTGCTTTAAAAACAAGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAGGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTTACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(205-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95.238

100

0.952

  eeP Streptococcus thermophilus LMG 18311

95

100

0.95