Detailed information NTG0939714

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: V6D45_RS19015
• Genome accession: NZ_CP145722
• Coordinates: 3757399..3758544 (+)
• Length: 381 a.a.
• NCBI ID: WP_338443406.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain kcgeb_S11
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3752399..3763544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6D45_RS18995 (V6D45_19000)	-	3752534..3753694 (+)	1161	WP_338444555.1	insulinase family protein	-
V6D45_RS19000 (V6D45_19005)	-	3753699..3754982 (+)	1284	WP_338443403.1	pitrilysin family protein	-
V6D45_RS19005 (V6D45_19010)	-	3754979..3755680 (+)	702	WP_338443404.1	bacteriocin biosynthesis protein AlbG	-
V6D45_RS19010 (V6D45_19015)	-	3755817..3757172 (-)	1356	WP_338443405.1	YncE family protein	-
V6D45_RS19015 (V6D45_19020)	rapF	3757399..3758544 (+)	1146	WP_338443406.1	response regulator aspartate phosphatase RapF	Regulator
V6D45_RS19020 (V6D45_19025)	phrF	3758528..3758647 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
V6D45_RS19025 (V6D45_19030)	-	3758875..3759351 (+)	477	WP_015384936.1	hypothetical protein	-
V6D45_RS19030 (V6D45_19035)	-	3759611..3760297 (+)	687	WP_338443408.1	hypothetical protein	-
V6D45_RS19035 (V6D45_19040)	-	3761773..3762420 (+)	648	WP_129092783.1	ABC transporter ATP-binding protein	-
V6D45_RS19040 (V6D45_19045)	-	3762413..3762976 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45636.09 Da
• Isoelectric Point: 5.1517

>NTDB_id=939714 V6D45_RS19015 WP_338443406.1 3757399..3758544(+) (rapF) [Bacillus spizizenii strain kcgeb_S11]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYSIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAREYHSKGMAYSQKAGDLIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFALDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=939714 V6D45_RS19015 WP_338443406.1 3757399..3758544(+) (rapF) [Bacillus spizizenii strain kcgeb_S11]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAGTATTTGCGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGATCAGGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAGAAAATGCGGATCGAGGAACAGCCGAGA
TTGTCAGATTTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAGCTAGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTTG
TTAAGGATCGAATAGAGAAGGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAGTATAAGATTGCTTCAGTGTCACTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGAAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATTGCTGTTTTTGAAGAATCTAACATTCTTCCTTCCCTGCCCCAAGCTTATTTTTT
AATTACACAAATTCATTATAAATTAGGAAAAATGGATAAAGCCCGTGAATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTTAATATATTTATCGGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTCTGAAGGTGGAACAAGTGAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	96.85	100	0.969
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572