Detailed information NTG0939689

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: V6D45_RS13010
• Genome accession: NZ_CP145722
• Coordinates: 2560562..2562892 (-)
• Length: 776 a.a.
• NCBI ID: WP_338442864.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain kcgeb_S11
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2555562..2567892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6D45_RS12975 (V6D45_12980)	-	2555900..2556238 (-)	339	WP_003226161.1	YqxA family protein	-
V6D45_RS12980 (V6D45_12985)	spoIIP	2556255..2557460 (-)	1206	WP_338442860.1	spore autolysin SpoIIP	-
V6D45_RS12985 (V6D45_12990)	gpr	2557523..2558629 (-)	1107	WP_338442861.1	GPR endopeptidase	-
V6D45_RS12990 (V6D45_12995)	rpsT	2558833..2559099 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
V6D45_RS12995 (V6D45_13000)	holA	2559114..2560157 (-)	1044	WP_338442862.1	DNA polymerase III subunit delta	-
V6D45_RS13000 (V6D45_13005)	-	2560197..2560346 (-)	150	WP_338442863.1	hypothetical protein	-
V6D45_RS13005 (V6D45_13010)	-	2560387..2560521 (+)	135	WP_003229983.1	YqzM family protein	-
V6D45_RS13010 (V6D45_13015)	comEC	2560562..2562892 (-)	2331	WP_338442864.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
V6D45_RS13015 (V6D45_13020)	-	2562896..2563465 (-)	570	WP_014114472.1	ComE operon protein 2	-
V6D45_RS13020 (V6D45_13025)	comEA	2563532..2564149 (-)	618	WP_268393816.1	helix-hairpin-helix domain-containing protein	Machinery gene
V6D45_RS13025 (V6D45_13030)	comER	2564233..2565054 (+)	822	WP_338442865.1	late competence protein ComER	-
V6D45_RS13030 (V6D45_13035)	-	2565120..2565863 (-)	744	WP_268393818.1	class I SAM-dependent methyltransferase	-
V6D45_RS13035 (V6D45_13040)	rsfS	2565860..2566216 (-)	357	WP_003237112.1	ribosome silencing factor	-
V6D45_RS13040 (V6D45_13045)	yqeK	2566234..2566794 (-)	561	WP_338442866.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
V6D45_RS13045 (V6D45_13050)	-	2566784..2567353 (-)	570	WP_014114477.1	nicotinate-nucleotide adenylyltransferase	-
V6D45_RS13050 (V6D45_13055)	yhbY	2567365..2567655 (-)	291	WP_014114478.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86598.04 Da
• Isoelectric Point: 7.6646

>NTDB_id=939689 V6D45_RS13010 WP_338442864.1 2560562..2562892(-) (comEC) [Bacillus spizizenii strain kcgeb_S11]
MRNSRLVLPLAAASATAGITAAAYFSVVFLFFLFLLIVLIKTRHAFLIFVCFFSFILFFALYAVTDSQNVSLYQRGTYQF
EAVIDSIPKIDGDRMSMVVKTPDGEKWASAYRIQSADEKDRLSYIEPGMACELTGSLEEPKHSTVPGTFDYNEYLYQQHI
HWNYSVTSIQNCSDPANFKHKLLSLRKYIISFTNDLLPPHSAGIVQALTVGDRFYVEDEVLNAYQKLGVVHLLAISGLHI
GILTAGLFYIMIRIGVTREKAAIMLLLFLPLYVMLTGAAPSVLRAALMSGIYLAGSLVKWRVHSAGAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTFLGQLAMVSMIAQLGSLPVLLYHFQQFSMISIPMNMVLVPFYTFCVLPGA
IAGVFLLSLSASAGRLFFSWFDFLISWTNKLITKIAEIDIFTIIIARPAPALLFLFTVTIILLLMAIEKRSFSQLMVTGG
MCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLSYLSEPWRQKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQAAREEGVPIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGGVSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGAN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=939689 V6D45_RS13010 WP_338442864.1 2560562..2562892(-) (comEC) [Bacillus spizizenii strain kcgeb_S11]
ATGCGTAATTCGCGTTTGGTATTGCCTTTGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCTCCGT
TGTTTTTCTCTTCTTCCTCTTTCTTCTCATCGTTTTAATCAAAACGAGACACGCTTTTCTCATTTTTGTTTGTTTCTTCT
CTTTTATACTGTTTTTTGCACTGTATGCAGTCACAGATTCCCAGAATGTCTCTTTATATCAGCGGGGCACCTATCAATTC
GAGGCAGTGATTGACAGTATCCCTAAAATTGATGGCGACCGTATGTCTATGGTCGTTAAGACGCCTGATGGTGAAAAATG
GGCCTCAGCGTATCGCATTCAGTCTGCTGATGAAAAAGATCGGCTTTCATACATAGAACCAGGAATGGCATGTGAATTAA
CTGGTTCATTGGAAGAACCGAAACATTCAACTGTGCCGGGTACATTTGATTATAACGAATATCTTTACCAACAGCATATT
CACTGGAACTATTCTGTCACATCGATCCAAAATTGCAGCGATCCTGCAAATTTTAAGCATAAGCTGCTCAGTTTGAGAAA
ATACATTATATCATTCACAAACGACCTGTTGCCTCCTCATTCGGCAGGAATCGTACAAGCACTTACAGTCGGTGACAGAT
TTTATGTGGAAGACGAAGTGCTTAACGCGTATCAAAAGCTTGGTGTCGTCCATCTCTTGGCGATTTCAGGACTCCACATT
GGCATTTTGACAGCCGGCTTGTTTTATATCATGATCCGTATTGGGGTAACAAGAGAAAAGGCGGCAATCATGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACGGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTCTGATGTCGGGCATTTACTTAG
CTGGAAGTCTCGTGAAATGGCGTGTACATTCAGCAGGTGCAATCTGCCTTTCATATATCGTCCTCTTGCTCTTCAATCCT
TACCATCTCTTCGAAGCCGGTTTTCAGCTGTCGTTCGCCGTCAGTTTTTCTTTAATTCTTTCCTCTTCTATTTTTCAGCA
AGTCAAAACCTTCTTAGGTCAGCTGGCAATGGTATCGATGATCGCTCAGCTGGGCTCACTTCCTGTTCTCCTGTATCATT
TCCAGCAGTTTTCCATGATCAGCATACCGATGAACATGGTGCTGGTTCCTTTTTATACCTTCTGTGTTTTACCGGGAGCT
ATAGCAGGTGTTTTTCTATTAAGCCTTTCCGCTTCGGCCGGTCGATTGTTTTTCAGCTGGTTTGATTTCTTGATAAGCTG
GACCAACAAGCTCATCACAAAAATTGCAGAGATTGATATATTCACGATCATCATTGCACGTCCCGCACCTGCTCTGCTCT
TTTTGTTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTTTCGCAGCTGATGGTAACTGGCGGC
ATGTGCTGCGCTGTGCTCAGTCTTCTCTTTATTTATCCTCGTCTTAGTTCTGAAGGAGAGGTCGATATGATTGATATTGG
ACAGGGTGACAGCATGTATGTAGGTGCTCCGCATCAGCGGGGCCATGTCTTAATTGATACTGGCGGCACTTTGTCTTACT
TGTCAGAGCCTTGGCGGCAAAAACAGCACCCGTTTTCACTGGGAGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATTAAACAGCTTGATGCTTTAATTCTGACGCATGCTGACCAAGATCATATTGGAGAGGCGGAAACTCTGCTGAAGCATCA
TAAAGTGAAACGCCTCGTGATTCCGAAAGGGTTCGTGTCGGAACCTAAAGACGAAAAAGTGCTGCAGGCTGCCAGAGAGG
AGGGAGTCCCAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
ACACCTGATCCGGCAAGCAAAAATAATTCTTCTCTTGTTCTGTGGATGAAAACGGGCGGTGTGAGCTGGATCTTGACGGG
GGATCTGGAGAAAGAAGGGGAACAGGAGGTAATGAACGTGTTTCCGAATATCAAAGCGGACGTATTAAAGGTGGGGCACC
ATGGAAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACGGCCATTATCTCGGCGGGGGCAAAC
AATCGGTACCATCATCCCCATCAAGAAGTTCTGCAAATATTACAGAGACATTCCATCCGCGTGCTCCGCACCGATCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (22-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	88.66	100	0.887