Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | OO714_RS09360 | Genome accession | NZ_AP025740 |
| Coordinates | 2015701..2016081 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2010701..2021081
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO714_RS09330 (KAMO5_18570) | tadA | 2010820..2011323 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| OO714_RS09335 (KAMO5_18580) | - | 2011330..2012454 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| OO714_RS09340 (KAMO5_18590) | ung | 2012451..2013164 (-) | 714 | WP_001177525.1 | uracil-DNA glycosylase | - |
| OO714_RS09345 (KAMO5_18600) | - | 2013215..2013811 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| OO714_RS09350 (KAMO5_18610) | gspK | 2014041..2015000 (-) | 960 | WP_000301461.1 | type II secretion system minor pseudopilin GspK | - |
| OO714_RS09355 (KAMO5_18620) | xcpW | 2015000..2015701 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| OO714_RS09360 (KAMO5_18630) | xcpV | 2015701..2016081 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| OO714_RS09365 (KAMO5_18640) | - | 2016071..2016625 (-) | 555 | WP_000841370.1 | type II secretion system protein | - |
| OO714_RS09370 (KAMO5_18650) | - | 2016635..2017243 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| OO714_RS09375 (KAMO5_18660) | - | 2017281..2018054 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| OO714_RS09380 (KAMO5_18670) | - | 2018072..2018413 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| OO714_RS09385 (KAMO5_18680) | - | 2018425..2019405 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| OO714_RS09390 (KAMO5_18690) | kdsB | 2019417..2020178 (-) | 762 | WP_000680698.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=93874 OO714_RS09360 WP_000836911.1 2015701..2016081(-) (xcpV) [Acinetobacter baumannii strain ATCC 19606]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=93874 OO714_RS09360 WP_000836911.1 2015701..2016081(-) (xcpV) [Acinetobacter baumannii strain ATCC 19606]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |