Detailed information NTG0093873

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OO714_RS09355
• Genome accession: NZ_AP025740
• Coordinates: 2015000..2015701 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain ATCC 19606
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2010000..2020701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OO714_RS09325 (KAMO5_18560)	-	2010307..2010750 (-)	444	WP_001246675.1	SRPBCC family protein	-
OO714_RS09330 (KAMO5_18570)	tadA	2010820..2011323 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
OO714_RS09335 (KAMO5_18580)	-	2011330..2012454 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OO714_RS09340 (KAMO5_18590)	ung	2012451..2013164 (-)	714	WP_001177525.1	uracil-DNA glycosylase	-
OO714_RS09345 (KAMO5_18600)	-	2013215..2013811 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
OO714_RS09350 (KAMO5_18610)	gspK	2014041..2015000 (-)	960	WP_000301461.1	type II secretion system minor pseudopilin GspK	-
OO714_RS09355 (KAMO5_18620)	xcpW	2015000..2015701 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OO714_RS09360 (KAMO5_18630)	xcpV	2015701..2016081 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
OO714_RS09365 (KAMO5_18640)	-	2016071..2016625 (-)	555	WP_000841370.1	type II secretion system protein	-
OO714_RS09370 (KAMO5_18650)	-	2016635..2017243 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OO714_RS09375 (KAMO5_18660)	-	2017281..2018054 (-)	774	WP_000497298.1	TatD family hydrolase	-
OO714_RS09380 (KAMO5_18670)	-	2018072..2018413 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
OO714_RS09385 (KAMO5_18680)	-	2018425..2019405 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
OO714_RS09390 (KAMO5_18690)	kdsB	2019417..2020178 (-)	762	WP_000680698.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=93873 OO714_RS09355 WP_000594572.1 2015000..2015701(-) (xcpW) [Acinetobacter baumannii strain ATCC 19606]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=93873 OO714_RS09355 WP_000594572.1 2015000..2015701(-) (xcpW) [Acinetobacter baumannii strain ATCC 19606]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
TGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAACTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991