Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C80_RS03785 | Genome accession | NZ_CP145258 |
| Coordinates | 804890..805285 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis subsp. urealyticus strain DSM 6717 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 799890..810285
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C80_RS03755 (V6C80_03755) | atpD | 800108..801520 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C80_RS03760 (V6C80_03760) | - | 801540..801944 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C80_RS03765 (V6C80_03765) | - | 802085..802318 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C80_RS03770 (V6C80_03770) | murA | 802428..803693 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C80_RS03775 (V6C80_03775) | fabZ | 803738..804175 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C80_RS03780 (V6C80_03780) | - | 804256..804699 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C80_RS03785 (V6C80_03785) | ssb | 804890..805285 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C80_RS03790 (V6C80_03790) | - | 805680..806405 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| V6C80_RS03795 (V6C80_03795) | tenA | 806701..807396 (+) | 696 | WP_047796516.1 | thiaminase II | - |
| V6C80_RS03800 (V6C80_03800) | thiD | 807383..808204 (+) | 822 | WP_047796515.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C80_RS03805 (V6C80_03805) | thiM | 808197..808985 (+) | 789 | WP_002435520.1 | hydroxyethylthiazole kinase | - |
| V6C80_RS03810 (V6C80_03810) | thiE | 808992..809630 (+) | 639 | WP_047796514.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=938335 V6C80_RS03785 WP_002435780.1 804890..805285(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain DSM 6717]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=938335 V6C80_RS03785 WP_002435780.1 804890..805285(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain DSM 6717]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |