Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   V6C80_RS01125 Genome accession   NZ_CP145258
Coordinates   268287..269183 (+) Length   298 a.a.
NCBI ID   WP_058121551.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. urealyticus strain DSM 6717     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 263287..274183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C80_RS01100 (V6C80_01100) - 263599..263700 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C80_RS01105 (V6C80_01105) - 263883..265424 (+) 1542 WP_103156980.1 NAD(P)H-binding protein -
  V6C80_RS01110 (V6C80_01110) - 265622..267106 (-) 1485 WP_002436173.1 alkaline phosphatase -
  V6C80_RS01115 (V6C80_01115) - 267433..267585 (+) 153 WP_002436229.1 hypothetical protein -
  V6C80_RS01120 (V6C80_01120) braR 267616..268281 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  V6C80_RS01125 (V6C80_01125) braS 268287..269183 (+) 897 WP_058121551.1 sensor histidine kinase Regulator
  V6C80_RS01130 (V6C80_01130) - 269293..270042 (+) 750 WP_058121550.1 ABC transporter ATP-binding protein -
  V6C80_RS01135 (V6C80_01135) - 270056..272059 (+) 2004 WP_248289275.1 ABC transporter permease -
  V6C80_RS01140 (V6C80_01140) - 272285..273157 (+) 873 WP_103156982.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34557.85 Da        Isoelectric Point: 5.6334

>NTDB_id=938331 V6C80_RS01125 WP_058121551.1 268287..269183(+) (braS) [Staphylococcus capitis subsp. urealyticus strain DSM 6717]
MLLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIFIHWWVKYLGFKRNEDLKEKVDNLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYEKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSGLGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=938331 V6C80_RS01125 WP_058121551.1 268287..269183(+) (braS) [Staphylococcus capitis subsp. urealyticus strain DSM 6717]
ATGTTGCTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGTCTTGCGTTAGGAATCGTATTACTCATCATTTTTATTCATTGGTGGG
TAAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGGTAGATAATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTGGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAATTA
ATACGTCCGCTAATCATGAAATATCGAATTCAGTTTATCGAACAACATACTAAAATTCACTATGAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ACATTTGGATTGAATTTGATTCTGCTAAACAAACATTAATCATTAAAGACAATGGTGTAGGTATTAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGAGGTCGATGTAGATTCAGGACTTGGTGAAGGTACGACATTTAAAATACATT
TTCCCAACGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638