Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V6C80_RS01120 Genome accession   NZ_CP145258
Coordinates   267616..268281 (+) Length   221 a.a.
NCBI ID   WP_002436233.1    Uniprot ID   A0A0S4M7T5
Organism   Staphylococcus capitis subsp. urealyticus strain DSM 6717     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 262616..273281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C80_RS01095 (V6C80_01095) - 262701..263327 (-) 627 WP_002436199.1 FMN-dependent NADH-azoreductase -
  V6C80_RS01100 (V6C80_01100) - 263599..263700 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C80_RS01105 (V6C80_01105) - 263883..265424 (+) 1542 WP_103156980.1 NAD(P)H-binding protein -
  V6C80_RS01110 (V6C80_01110) - 265622..267106 (-) 1485 WP_002436173.1 alkaline phosphatase -
  V6C80_RS01115 (V6C80_01115) - 267433..267585 (+) 153 WP_002436229.1 hypothetical protein -
  V6C80_RS01120 (V6C80_01120) braR 267616..268281 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  V6C80_RS01125 (V6C80_01125) braS 268287..269183 (+) 897 WP_058121551.1 sensor histidine kinase Regulator
  V6C80_RS01130 (V6C80_01130) - 269293..270042 (+) 750 WP_058121550.1 ABC transporter ATP-binding protein -
  V6C80_RS01135 (V6C80_01135) - 270056..272059 (+) 2004 WP_248289275.1 ABC transporter permease -
  V6C80_RS01140 (V6C80_01140) - 272285..273157 (+) 873 WP_103156982.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25518.37 Da        Isoelectric Point: 4.3102

>NTDB_id=938330 V6C80_RS01120 WP_002436233.1 267616..268281(+) (braR) [Staphylococcus capitis subsp. urealyticus strain DSM 6717]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=938330 V6C80_RS01120 WP_002436233.1 267616..268281(+) (braR) [Staphylococcus capitis subsp. urealyticus strain DSM 6717]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTATTAGATATCAATT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCAAGA
ACCGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCGTTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTCGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATCGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S4M7T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

83.258

100

0.833