Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C83_RS04160 | Genome accession | NZ_CP145256 |
| Coordinates | 879923..880318 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1191092 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 874923..885318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C83_RS04130 (V6C83_04125) | atpD | 875141..876553 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C83_RS04135 (V6C83_04130) | - | 876573..876977 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C83_RS04140 (V6C83_04135) | - | 877118..877351 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C83_RS04145 (V6C83_04140) | murA | 877461..878726 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C83_RS04150 (V6C83_04145) | fabZ | 878771..879208 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C83_RS04155 (V6C83_04150) | - | 879289..879732 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C83_RS04160 (V6C83_04155) | ssb | 879923..880318 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C83_RS04165 (V6C83_04160) | - | 880713..881438 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C83_RS04170 (V6C83_04165) | tenA | 881734..882423 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C83_RS04175 (V6C83_04170) | thiD | 882416..883237 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C83_RS04180 (V6C83_04175) | thiM | 883230..884018 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C83_RS04185 (V6C83_04180) | thiE | 884025..884663 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=938301 V6C83_RS04160 WP_023351359.1 879923..880318(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1191092]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=938301 V6C83_RS04160 WP_023351359.1 879923..880318(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1191092]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |