Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C94_RS04265 | Genome accession | NZ_CP145253 |
| Coordinates | 898619..899014 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1191106 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 893619..904014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C94_RS04235 (V6C94_04245) | atpD | 893837..895249 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C94_RS04240 (V6C94_04250) | - | 895269..895673 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C94_RS04245 (V6C94_04255) | - | 895814..896047 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C94_RS04250 (V6C94_04260) | murA | 896157..897422 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C94_RS04255 (V6C94_04265) | fabZ | 897467..897904 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C94_RS04260 (V6C94_04270) | - | 897985..898428 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C94_RS04265 (V6C94_04275) | ssb | 898619..899014 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C94_RS04270 (V6C94_04280) | - | 899409..900134 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C94_RS04275 (V6C94_04285) | tenA | 900430..901119 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C94_RS04280 (V6C94_04290) | thiD | 901112..901933 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C94_RS04285 (V6C94_04295) | thiM | 901926..902714 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C94_RS04290 (V6C94_04300) | thiE | 902721..903359 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=938266 V6C94_RS04265 WP_023351359.1 898619..899014(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1191106]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=938266 V6C94_RS04265 WP_023351359.1 898619..899014(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1191106]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |