Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C79_RS04185 | Genome accession | NZ_CP145251 |
| Coordinates | 882461..882856 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365665 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 877461..887856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C79_RS04155 (V6C79_04140) | atpD | 877679..879091 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C79_RS04160 (V6C79_04145) | - | 879111..879515 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C79_RS04165 (V6C79_04150) | - | 879656..879889 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C79_RS04170 (V6C79_04155) | murA | 879999..881264 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C79_RS04175 (V6C79_04160) | fabZ | 881309..881746 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C79_RS04180 (V6C79_04165) | - | 881827..882270 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C79_RS04185 (V6C79_04170) | ssb | 882461..882856 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C79_RS04190 (V6C79_04175) | - | 883251..883976 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C79_RS04195 (V6C79_04180) | tenA | 884272..884961 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C79_RS04200 (V6C79_04185) | thiD | 884954..885775 (+) | 822 | WP_367122077.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C79_RS04205 (V6C79_04190) | thiM | 885768..886556 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C79_RS04210 (V6C79_04195) | thiE | 886563..887201 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=938231 V6C79_RS04185 WP_023351359.1 882461..882856(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365665]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=938231 V6C79_RS04185 WP_023351359.1 882461..882856(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365665]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |