Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C62_RS04115 | Genome accession | NZ_CP145249 |
| Coordinates | 850039..850434 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365666 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 845039..855434
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C62_RS04085 (V6C62_04090) | atpD | 845257..846669 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C62_RS04090 (V6C62_04095) | - | 846689..847093 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C62_RS04095 (V6C62_04100) | - | 847234..847467 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C62_RS04100 (V6C62_04105) | murA | 847577..848842 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C62_RS04105 (V6C62_04110) | fabZ | 848887..849324 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C62_RS04110 (V6C62_04115) | - | 849405..849848 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C62_RS04115 (V6C62_04120) | ssb | 850039..850434 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C62_RS04120 (V6C62_04125) | - | 850829..851554 (+) | 726 | WP_367140433.1 | transglycosylase family protein | - |
| V6C62_RS04125 (V6C62_04130) | tenA | 851850..852539 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C62_RS04130 (V6C62_04135) | thiD | 852532..853353 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C62_RS04135 (V6C62_04140) | thiM | 853346..854134 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C62_RS04140 (V6C62_04145) | thiE | 854141..854779 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=938196 V6C62_RS04115 WP_023351359.1 850039..850434(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365666]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=938196 V6C62_RS04115 WP_023351359.1 850039..850434(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365666]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |