Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   V6C47_RS04385 Genome accession   NZ_CP145248
Coordinates   915640..916686 (+) Length   348 a.a.
NCBI ID   WP_002435929.1    Uniprot ID   A0A0S4MEI3
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1365669     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 910640..921686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C47_RS04355 (V6C47_04370) - 910923..911648 (+) 726 WP_002469718.1 type 1 glutamine amidotransferase -
  V6C47_RS04360 (V6C47_04375) isaB 911871..912399 (+) 529 Protein_854 immunodominant staphylococcal antigen IsaB family protein -
  V6C47_RS04365 (V6C47_04380) - 912477..913466 (-) 990 WP_002435886.1 FUSC family protein -
  V6C47_RS04370 (V6C47_04385) map 913641..914396 (+) 756 WP_367121708.1 type I methionyl aminopeptidase -
  V6C47_RS04375 (V6C47_04390) - 914541..914927 (+) 387 WP_002453601.1 hypothetical protein -
  V6C47_RS04380 (V6C47_04395) liaF 914942..915643 (+) 702 WP_002435891.1 cell wall-active antibiotics response protein LiaF -
  V6C47_RS04385 (V6C47_04400) vraS 915640..916686 (+) 1047 WP_002435929.1 sensor histidine kinase Regulator
  V6C47_RS04390 (V6C47_04405) vraR 916676..917305 (+) 630 WP_367121709.1 two-component system response regulator VraR Regulator
  V6C47_RS04395 (V6C47_04410) - 917370..918614 (-) 1245 WP_367121710.1 YihY/virulence factor BrkB family protein -
  V6C47_RS04400 (V6C47_04415) - 918951..919235 (-) 285 WP_002435890.1 hypothetical protein -
  V6C47_RS04405 (V6C47_04420) - 919242..919706 (-) 465 WP_002435947.1 low molecular weight protein-tyrosine-phosphatase -
  V6C47_RS04410 (V6C47_04425) - 919847..920053 (+) 207 WP_049427714.1 DUF1128 domain-containing protein -
  V6C47_RS04415 (V6C47_04430) - 920067..921308 (+) 1242 WP_367121711.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40136.57 Da        Isoelectric Point: 6.0600

>NTDB_id=938164 V6C47_RS04385 WP_002435929.1 915640..916686(+) (vraS) [Staphylococcus capitis subsp. urealyticus strain Sc1365669]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNILIILLCIIVGSVLAYKINQQNDWLKS
QIERSIEGETVGINDQNLELYSETLEIYHTLVPLNQELHRLRMKTQNMTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESKLEPPLDQQIPVLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGSKVTVELFNKEDYLLLRIQDNGKGFNVDEKFEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDESNGD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=938164 V6C47_RS04385 WP_002435929.1 915640..916686(+) (vraS) [Staphylococcus capitis subsp. urealyticus strain Sc1365669]
ATGAATCACTACTTGAGAGCAATTGGTTCAATGCTAATACTTGTATATAGCATGCTAACTGCTTTTTTATTCATTGATAA
GGTGTTCGTCAATATTATTTATTTTCAAGGGATGTTTTACACCCAAATTTTTGGAATACCAGTATTTTTATTCCTAAATA
TATTAATCATCTTACTATGTATTATCGTTGGCTCTGTGTTAGCGTATAAAATCAATCAACAAAATGATTGGCTTAAGTCA
CAAATTGAAAGGTCTATTGAAGGTGAAACAGTAGGCATAAATGATCAAAACCTAGAGTTATACAGTGAAACGTTAGAAAT
TTACCATACTTTAGTTCCTTTAAATCAAGAATTACACCGATTAAGAATGAAAACGCAGAATATGACCAATGAAAATTATA
ATATGAATGATGTAAAAGTGAAGAAAATTATTGAAGACGAACGACAACGTTTAGCAAGAGAACTACATGACTCTGTTAGT
CAACAACTATTTGCAGCAAGTATGATGTTGTCAGCGATTAAAGAGTCAAAATTAGAACCACCTTTAGACCAACAAATACC
TGTACTAGAGAAGATGGTTCAAGACTCTCAGCTCGAAATGAGAGCATTATTATTACATCTAAGACCTATTGGTTTGAAAG
ACAAATCATTAGGAGAGGGTATTAAAGATTTAGTCATTGATCTTCAAAAGAAAGTCCCTATGAAAGTTGTTCATGAAATT
CAAGATTTCAAAGTACCAAAAGGGATAGAAGATCATTTGTTTAGAATCACTCAAGAGGCTATTTCTAATACATTACGACA
CTCTAATGGTTCTAAGGTAACAGTTGAATTATTTAATAAAGAAGATTATTTACTACTTAGAATTCAAGATAATGGTAAAG
GTTTTAATGTAGATGAAAAATTTGAACAGAGTTATGGATTAAAAAATATGAGAGAACGTGCTTTAGAGATTGGTGCCACA
TTCCATATCGTATCGTTACCGGATTCAGGTACGAGAATAGAAGTTAAAGCACCATTGAATAAGGAGGATGAATCAAATGG
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0S4MEI3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

93.586

98.563

0.922