Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C47_RS03780 | Genome accession | NZ_CP145248 |
| Coordinates | 793572..793967 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365669 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 788572..798967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C47_RS03750 (V6C47_03765) | atpD | 788773..790185 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C47_RS03755 (V6C47_03770) | - | 790205..790609 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C47_RS03760 (V6C47_03775) | - | 790750..790983 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C47_RS03765 (V6C47_03780) | murA | 791093..792358 (+) | 1266 | WP_367121647.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C47_RS03770 (V6C47_03785) | fabZ | 792403..792840 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C47_RS03775 (V6C47_03790) | - | 792920..793381 (-) | 462 | WP_367121648.1 | YwpF-like family protein | - |
| V6C47_RS03780 (V6C47_03795) | ssb | 793572..793967 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C47_RS03785 (V6C47_03800) | - | 794362..795090 (+) | 729 | WP_367121650.1 | transglycosylase family protein | - |
| V6C47_RS03790 (V6C47_03805) | tenA | 795386..796075 (+) | 690 | WP_367121651.1 | thiaminase II | - |
| V6C47_RS03795 (V6C47_03810) | thiD | 796068..796889 (+) | 822 | WP_037551265.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C47_RS03800 (V6C47_03815) | thiM | 796882..797670 (+) | 789 | WP_002435520.1 | hydroxyethylthiazole kinase | - |
| V6C47_RS03805 (V6C47_03820) | thiE | 797677..798315 (+) | 639 | WP_037551262.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=938162 V6C47_RS03780 WP_002435780.1 793572..793967(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365669]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=938162 V6C47_RS03780 WP_002435780.1 793572..793967(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365669]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
TTTTTGTGTAGCAACCGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
TTTTTGTGTAGCAACCGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |