Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   V6D01_RS01360 Genome accession   NZ_CP145244
Coordinates   293569..294465 (+) Length   298 a.a.
NCBI ID   WP_049307351.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1365670     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 288569..299465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6D01_RS01335 (V6D01_01325) - 288885..288986 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6D01_RS01340 (V6D01_01330) - 289170..290711 (+) 1542 WP_023351027.1 NAD(P)H-binding protein -
  V6D01_RS01345 (V6D01_01335) - 290904..292388 (-) 1485 WP_002436173.1 alkaline phosphatase -
  V6D01_RS01350 (V6D01_01340) - 292715..292867 (+) 153 WP_002436229.1 hypothetical protein -
  V6D01_RS01355 (V6D01_01345) braR 292898..293563 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  V6D01_RS01360 (V6D01_01350) braS 293569..294465 (+) 897 WP_049307351.1 sensor histidine kinase Regulator
  V6D01_RS01365 (V6D01_01355) - 294575..295324 (+) 750 WP_002436183.1 ABC transporter ATP-binding protein -
  V6D01_RS01370 (V6D01_01360) - 295308..297335 (+) 2028 WP_023351031.1 ABC transporter permease -
  V6D01_RS01375 (V6D01_01365) - 297562..298275 (+) 714 WP_367122892.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34643.00 Da        Isoelectric Point: 5.8756

>NTDB_id=938125 V6D01_RS01360 WP_049307351.1 293569..294465(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1365670]
MLLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIFIHWWVKYLGFKRNEDLKEKIDNLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYKKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSELGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=938125 V6D01_RS01360 WP_049307351.1 293569..294465(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1365670]
ATGTTGCTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGTCTTGCGTTAGGAATCGTATTACTCATCATTTTTATTCATTGGTGGG
TAAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGATAGATAATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTTGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAATTA
ATACGTCCGCTAATCATGAAATATCGAATTCAGTTTATCGAACAACATACTAAAATTCACTATAAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ATATTTGGATTGAATTTGATTCTGCTAAACAAACACTAATCATTAAAGATAATGGTGTAGGTATCAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGAGGTCGATGTAGATTCAGAACTTGGTGAAGGTACGACATTTAAAATACATT
TTCCCAACGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638