Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V6D01_RS01355 Genome accession   NZ_CP145244
Coordinates   292898..293563 (+) Length   221 a.a.
NCBI ID   WP_002436233.1    Uniprot ID   A0A0S4M7T5
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1365670     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 287898..298563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6D01_RS01330 (V6D01_01320) - 287989..288615 (-) 627 WP_002436199.1 FMN-dependent NADH-azoreductase -
  V6D01_RS01335 (V6D01_01325) - 288885..288986 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6D01_RS01340 (V6D01_01330) - 289170..290711 (+) 1542 WP_023351027.1 NAD(P)H-binding protein -
  V6D01_RS01345 (V6D01_01335) - 290904..292388 (-) 1485 WP_002436173.1 alkaline phosphatase -
  V6D01_RS01350 (V6D01_01340) - 292715..292867 (+) 153 WP_002436229.1 hypothetical protein -
  V6D01_RS01355 (V6D01_01345) braR 292898..293563 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  V6D01_RS01360 (V6D01_01350) braS 293569..294465 (+) 897 WP_049307351.1 sensor histidine kinase Regulator
  V6D01_RS01365 (V6D01_01355) - 294575..295324 (+) 750 WP_002436183.1 ABC transporter ATP-binding protein -
  V6D01_RS01370 (V6D01_01360) - 295308..297335 (+) 2028 WP_023351031.1 ABC transporter permease -
  V6D01_RS01375 (V6D01_01365) - 297562..298275 (+) 714 WP_367122892.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25518.37 Da        Isoelectric Point: 4.3102

>NTDB_id=938124 V6D01_RS01355 WP_002436233.1 292898..293563(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365670]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=938124 V6D01_RS01355 WP_002436233.1 292898..293563(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365670]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTATTAGATATCAACT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCGAGA
ACGGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCATTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTCGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATTGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S4M7T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

83.258

100

0.833