Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C67_RS03945 | Genome accession | NZ_CP145238 |
| Coordinates | 796170..796565 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365674 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 791170..801565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C67_RS03915 (V6C67_03915) | atpD | 791388..792800 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C67_RS03920 (V6C67_03920) | - | 792820..793224 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C67_RS03925 (V6C67_03925) | - | 793365..793598 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C67_RS03930 (V6C67_03930) | murA | 793708..794973 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C67_RS03935 (V6C67_03935) | fabZ | 795018..795455 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C67_RS03940 (V6C67_03940) | - | 795536..795979 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C67_RS03945 (V6C67_03945) | ssb | 796170..796565 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C67_RS03950 (V6C67_03950) | - | 796960..797685 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C67_RS03955 (V6C67_03955) | tenA | 797981..798670 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C67_RS03960 (V6C67_03960) | thiD | 798663..799484 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C67_RS03965 (V6C67_03965) | thiM | 799477..800265 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C67_RS03970 (V6C67_03970) | thiE | 800272..800910 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=938065 V6C67_RS03945 WP_023351359.1 796170..796565(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365674]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=938065 V6C67_RS03945 WP_023351359.1 796170..796565(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365674]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |