Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C70_RS04415 | Genome accession | NZ_CP145235 |
| Coordinates | 879217..879612 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365688 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 874217..884612
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C70_RS04385 (V6C70_04370) | atpD | 874435..875847 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C70_RS04390 (V6C70_04375) | - | 875867..876271 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C70_RS04395 (V6C70_04380) | - | 876412..876645 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C70_RS04400 (V6C70_04385) | murA | 876755..878020 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C70_RS04405 (V6C70_04390) | fabZ | 878065..878502 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C70_RS04410 (V6C70_04395) | - | 878583..879026 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C70_RS04415 (V6C70_04400) | ssb | 879217..879612 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C70_RS04420 (V6C70_04405) | - | 880007..880732 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C70_RS04425 (V6C70_04410) | tenA | 881028..881717 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C70_RS04430 (V6C70_04415) | thiD | 881710..882531 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C70_RS04435 (V6C70_04420) | thiM | 882524..883312 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C70_RS04440 (V6C70_04425) | thiE | 883319..883957 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=937996 V6C70_RS04415 WP_023351359.1 879217..879612(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365688]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937996 V6C70_RS04415 WP_023351359.1 879217..879612(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365688]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |