Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C68_RS03840 | Genome accession | NZ_CP145228 |
| Coordinates | 816646..817041 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365695 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 811646..822041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C68_RS03810 (V6C68_03805) | atpD | 811864..813276 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C68_RS03815 (V6C68_03810) | - | 813296..813700 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C68_RS03820 (V6C68_03815) | - | 813841..814074 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C68_RS03825 (V6C68_03820) | murA | 814184..815449 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C68_RS03830 (V6C68_03825) | fabZ | 815494..815931 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C68_RS03835 (V6C68_03830) | - | 816012..816455 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C68_RS03840 (V6C68_03835) | ssb | 816646..817041 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C68_RS03845 (V6C68_03840) | - | 817436..818161 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C68_RS03850 (V6C68_03845) | tenA | 818457..819146 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C68_RS03855 (V6C68_03850) | thiD | 819139..819960 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C68_RS03860 (V6C68_03855) | thiM | 819953..820741 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C68_RS03865 (V6C68_03860) | thiE | 820748..821386 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=937958 V6C68_RS03840 WP_023351359.1 816646..817041(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365695]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937958 V6C68_RS03840 WP_023351359.1 816646..817041(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365695]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |