Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C55_RS03870 | Genome accession | NZ_CP145224 |
| Coordinates | 826206..826601 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365701 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 821206..831601
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C55_RS03840 (V6C55_03840) | atpD | 821424..822836 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C55_RS03845 (V6C55_03845) | - | 822856..823260 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C55_RS03850 (V6C55_03850) | - | 823401..823634 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C55_RS03855 (V6C55_03855) | murA | 823744..825009 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C55_RS03860 (V6C55_03860) | fabZ | 825054..825491 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C55_RS03865 (V6C55_03865) | - | 825572..826015 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C55_RS03870 (V6C55_03870) | ssb | 826206..826601 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C55_RS03875 (V6C55_03875) | - | 826996..827721 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| V6C55_RS03880 (V6C55_03880) | tenA | 828017..828712 (+) | 696 | WP_047796516.1 | thiaminase II | - |
| V6C55_RS03885 (V6C55_03885) | thiD | 828699..829520 (+) | 822 | WP_047796515.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C55_RS03890 (V6C55_03890) | thiM | 829513..830301 (+) | 789 | WP_002435520.1 | hydroxyethylthiazole kinase | - |
| V6C55_RS03895 (V6C55_03895) | thiE | 830308..830946 (+) | 639 | WP_047796514.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=937924 V6C55_RS03870 WP_002435780.1 826206..826601(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365701]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937924 V6C55_RS03870 WP_002435780.1 826206..826601(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365701]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |