Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C77_RS04175 | Genome accession | NZ_CP145218 |
| Coordinates | 881035..881430 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365750 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 876035..886430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C77_RS04145 (V6C77_04135) | atpD | 876253..877665 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C77_RS04150 (V6C77_04140) | - | 877685..878089 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C77_RS04155 (V6C77_04145) | - | 878230..878463 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C77_RS04160 (V6C77_04150) | murA | 878573..879838 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C77_RS04165 (V6C77_04155) | fabZ | 879883..880320 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C77_RS04170 (V6C77_04160) | - | 880401..880844 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C77_RS04175 (V6C77_04165) | ssb | 881035..881430 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C77_RS04180 (V6C77_04170) | - | 881825..882550 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C77_RS04185 (V6C77_04175) | tenA | 882846..883535 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C77_RS04190 (V6C77_04180) | thiD | 883528..884349 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C77_RS04195 (V6C77_04185) | thiM | 884342..885130 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C77_RS04200 (V6C77_04190) | thiE | 885137..885775 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=937855 V6C77_RS04175 WP_023351359.1 881035..881430(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365750]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937855 V6C77_RS04175 WP_023351359.1 881035..881430(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365750]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |