Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C92_RS04195 | Genome accession | NZ_CP145216 |
| Coordinates | 881637..882032 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365753 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 876637..887032
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C92_RS04165 (V6C92_04260) | atpD | 876855..878267 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C92_RS04170 (V6C92_04265) | - | 878287..878691 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C92_RS04175 (V6C92_04270) | - | 878832..879065 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C92_RS04180 (V6C92_04275) | murA | 879175..880440 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C92_RS04185 (V6C92_04280) | fabZ | 880485..880922 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C92_RS04190 (V6C92_04285) | - | 881003..881446 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C92_RS04195 (V6C92_04290) | ssb | 881637..882032 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C92_RS04200 (V6C92_04295) | - | 882427..883152 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C92_RS04205 (V6C92_04300) | tenA | 883448..884137 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C92_RS04210 (V6C92_04305) | thiD | 884130..884951 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C92_RS04215 (V6C92_04310) | thiM | 884944..885732 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C92_RS04220 (V6C92_04315) | thiE | 885739..886377 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=937819 V6C92_RS04195 WP_023351359.1 881637..882032(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365753]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937819 V6C92_RS04195 WP_023351359.1 881637..882032(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365753]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |