Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C87_RS04160 | Genome accession | NZ_CP145214 |
| Coordinates | 816064..816459 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1365754 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 811064..821459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C87_RS04130 (V6C87_04135) | atpD | 811282..812694 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C87_RS04135 (V6C87_04140) | - | 812714..813118 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C87_RS04140 (V6C87_04145) | - | 813259..813492 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| V6C87_RS04145 (V6C87_04150) | murA | 813602..814867 (+) | 1266 | WP_367009165.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C87_RS04150 (V6C87_04155) | fabZ | 814912..815349 (+) | 438 | WP_367009166.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C87_RS04155 (V6C87_04160) | - | 815430..815873 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C87_RS04160 (V6C87_04165) | ssb | 816064..816459 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C87_RS04165 (V6C87_04170) | - | 816854..817579 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| V6C87_RS04170 (V6C87_04175) | tenA | 817875..818570 (+) | 696 | WP_002453701.1 | thiaminase II | - |
| V6C87_RS04175 (V6C87_04180) | thiD | 818557..819378 (+) | 822 | WP_194381118.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C87_RS04180 (V6C87_04185) | thiM | 819371..820159 (+) | 789 | WP_367009167.1 | hydroxyethylthiazole kinase | - |
| V6C87_RS04185 (V6C87_04190) | thiE | 820166..820804 (+) | 639 | WP_367009168.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=937784 V6C87_RS04160 WP_002435780.1 816064..816459(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365754]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937784 V6C87_RS04160 WP_002435780.1 816064..816459(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1365754]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |