Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C56_RS03815 | Genome accession | NZ_CP145208 |
| Coordinates | 809437..809832 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1516939 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 804437..814832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C56_RS03785 (V6C56_03790) | atpD | 804655..806067 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C56_RS03790 (V6C56_03795) | - | 806087..806491 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C56_RS03795 (V6C56_03800) | - | 806632..806865 (+) | 234 | WP_186334395.1 | DUF1146 family protein | - |
| V6C56_RS03800 (V6C56_03805) | murA | 806975..808240 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C56_RS03805 (V6C56_03810) | fabZ | 808285..808722 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C56_RS03810 (V6C56_03815) | - | 808803..809246 (-) | 444 | WP_049427281.1 | YwpF-like family protein | - |
| V6C56_RS03815 (V6C56_03820) | ssb | 809437..809832 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C56_RS03820 (V6C56_03825) | - | 810227..810952 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| V6C56_RS03825 (V6C56_03830) | tenA | 811247..811936 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C56_RS03830 (V6C56_03835) | thiD | 811929..812750 (+) | 822 | WP_367010012.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C56_RS03835 (V6C56_03840) | thiM | 812743..813531 (+) | 789 | WP_002435520.1 | hydroxyethylthiazole kinase | - |
| V6C56_RS03840 (V6C56_03845) | thiE | 813538..814176 (+) | 639 | WP_037551262.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=937751 V6C56_RS03815 WP_002435780.1 809437..809832(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1516939]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937751 V6C56_RS03815 WP_002435780.1 809437..809832(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1516939]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |