Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | V6C61_RS03970 | Genome accession | NZ_CP145198 |
| Coordinates | 845350..845745 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis subsp. urealyticus strain Sc1516945 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 840350..850745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6C61_RS03940 (V6C61_03935) | atpD | 840568..841980 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| V6C61_RS03945 (V6C61_03940) | - | 842000..842404 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| V6C61_RS03950 (V6C61_03945) | - | 842545..842778 (+) | 234 | Protein_777 | DUF1146 family protein | - |
| V6C61_RS03955 (V6C61_03950) | murA | 842888..844153 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| V6C61_RS03960 (V6C61_03955) | fabZ | 844198..844635 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| V6C61_RS03965 (V6C61_03960) | - | 844716..845159 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| V6C61_RS03970 (V6C61_03965) | ssb | 845350..845745 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| V6C61_RS03975 (V6C61_03970) | - | 846139..846864 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| V6C61_RS03980 (V6C61_03975) | tenA | 847160..847849 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| V6C61_RS03985 (V6C61_03980) | thiD | 847842..848663 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| V6C61_RS03990 (V6C61_03985) | thiM | 848656..849444 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| V6C61_RS03995 (V6C61_03990) | thiE | 849451..850089 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=937648 V6C61_RS03970 WP_023351359.1 845350..845745(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1516945]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=937648 V6C61_RS03970 WP_023351359.1 845350..845745(+) (ssb) [Staphylococcus capitis subsp. urealyticus strain Sc1516945]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAAGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAAGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |