Detailed information NTG0937426

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: V5F86_RS13015
• Genome accession: NZ_CP145137
• Coordinates: 2560835..2563165 (-)
• Length: 776 a.a.
• NCBI ID: WP_338442864.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain kcgeb_sc
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2555835..2568165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5F86_RS12980 (V5F86_12985)	-	2556173..2556511 (-)	339	WP_003226161.1	YqxA family protein	-
V5F86_RS12985 (V5F86_12990)	spoIIP	2556528..2557733 (-)	1206	WP_338442860.1	spore autolysin SpoIIP	-
V5F86_RS12990 (V5F86_12995)	gpr	2557796..2558902 (-)	1107	WP_338442861.1	GPR endopeptidase	-
V5F86_RS12995 (V5F86_13000)	rpsT	2559106..2559372 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
V5F86_RS13000 (V5F86_13005)	holA	2559387..2560430 (-)	1044	WP_338442862.1	DNA polymerase III subunit delta	-
V5F86_RS13005 (V5F86_13010)	-	2560470..2560619 (-)	150	WP_338442863.1	hypothetical protein	-
V5F86_RS13010 (V5F86_13015)	-	2560660..2560794 (+)	135	WP_003229983.1	YqzM family protein	-
V5F86_RS13015 (V5F86_13020)	comEC	2560835..2563165 (-)	2331	WP_338442864.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
V5F86_RS13020 (V5F86_13025)	-	2563169..2563738 (-)	570	WP_014114472.1	ComE operon protein 2	-
V5F86_RS13025 (V5F86_13030)	comEA	2563805..2564422 (-)	618	WP_268393816.1	helix-hairpin-helix domain-containing protein	Machinery gene
V5F86_RS13030 (V5F86_13035)	comER	2564506..2565327 (+)	822	WP_338442865.1	late competence protein ComER	-
V5F86_RS13035 (V5F86_13040)	-	2565393..2566136 (-)	744	WP_268393818.1	class I SAM-dependent methyltransferase	-
V5F86_RS13040 (V5F86_13045)	rsfS	2566133..2566489 (-)	357	WP_003237112.1	ribosome silencing factor	-
V5F86_RS13045 (V5F86_13050)	yqeK	2566507..2567067 (-)	561	WP_338442866.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
V5F86_RS13050 (V5F86_13055)	-	2567057..2567626 (-)	570	WP_014114477.1	nicotinate-nucleotide adenylyltransferase	-
V5F86_RS13055 (V5F86_13060)	yhbY	2567638..2567928 (-)	291	WP_014114478.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86598.04 Da
• Isoelectric Point: 7.6646

>NTDB_id=937426 V5F86_RS13015 WP_338442864.1 2560835..2563165(-) (comEC) [Bacillus spizizenii strain kcgeb_sc]
MRNSRLVLPLAAASATAGITAAAYFSVVFLFFLFLLIVLIKTRHAFLIFVCFFSFILFFALYAVTDSQNVSLYQRGTYQF
EAVIDSIPKIDGDRMSMVVKTPDGEKWASAYRIQSADEKDRLSYIEPGMACELTGSLEEPKHSTVPGTFDYNEYLYQQHI
HWNYSVTSIQNCSDPANFKHKLLSLRKYIISFTNDLLPPHSAGIVQALTVGDRFYVEDEVLNAYQKLGVVHLLAISGLHI
GILTAGLFYIMIRIGVTREKAAIMLLLFLPLYVMLTGAAPSVLRAALMSGIYLAGSLVKWRVHSAGAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTFLGQLAMVSMIAQLGSLPVLLYHFQQFSMISIPMNMVLVPFYTFCVLPGA
IAGVFLLSLSASAGRLFFSWFDFLISWTNKLITKIAEIDIFTIIIARPAPALLFLFTVTIILLLMAIEKRSFSQLMVTGG
MCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLSYLSEPWRQKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQAAREEGVPIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGGVSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGAN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=937426 V5F86_RS13015 WP_338442864.1 2560835..2563165(-) (comEC) [Bacillus spizizenii strain kcgeb_sc]
ATGCGTAATTCGCGTTTGGTATTGCCTTTGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCTCCGT
TGTTTTTCTCTTCTTCCTCTTTCTTCTCATCGTTTTAATCAAAACGAGACACGCTTTTCTCATTTTTGTTTGTTTCTTCT
CTTTTATACTGTTTTTTGCACTGTATGCAGTCACAGATTCCCAGAATGTCTCTTTATATCAGCGGGGCACCTATCAATTC
GAGGCAGTGATTGACAGTATCCCTAAAATTGATGGCGACCGTATGTCTATGGTCGTTAAGACGCCTGATGGTGAAAAATG
GGCCTCAGCGTATCGCATTCAGTCTGCTGATGAAAAAGATCGGCTTTCATACATAGAACCAGGAATGGCATGTGAATTAA
CTGGTTCATTGGAAGAACCGAAACATTCAACTGTGCCGGGTACATTTGATTATAACGAATATCTTTACCAACAGCATATT
CACTGGAACTATTCTGTCACATCGATCCAAAATTGCAGCGATCCTGCAAATTTTAAGCATAAGCTGCTCAGTTTGAGAAA
ATACATTATATCATTCACAAACGACCTGTTGCCTCCTCATTCGGCAGGAATCGTACAAGCACTTACAGTCGGTGACAGAT
TTTATGTGGAAGACGAAGTGCTTAACGCGTATCAAAAGCTTGGTGTCGTCCATCTCTTGGCGATTTCAGGACTCCACATT
GGCATTTTGACAGCCGGCTTGTTTTATATCATGATCCGTATTGGGGTAACAAGAGAAAAGGCGGCAATCATGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACGGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTCTGATGTCGGGCATTTACTTAG
CTGGAAGTCTCGTGAAATGGCGTGTACATTCAGCAGGTGCAATCTGCCTTTCATATATCGTCCTCTTGCTCTTCAATCCT
TACCATCTCTTCGAAGCCGGTTTTCAGCTGTCGTTCGCCGTCAGTTTTTCTTTAATTCTTTCCTCTTCTATTTTTCAGCA
AGTCAAAACCTTCTTAGGTCAGCTGGCAATGGTATCGATGATCGCTCAGCTGGGCTCACTTCCTGTTCTCCTGTATCATT
TCCAGCAGTTTTCCATGATCAGCATACCGATGAACATGGTGCTGGTTCCTTTTTATACCTTCTGTGTTTTACCGGGAGCT
ATAGCAGGTGTTTTTCTATTAAGCCTTTCCGCTTCGGCCGGTCGATTGTTTTTCAGCTGGTTTGATTTCTTGATAAGCTG
GACCAACAAGCTCATCACAAAAATTGCAGAGATTGATATATTCACGATCATCATTGCACGTCCCGCACCTGCTCTGCTCT
TTTTGTTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTTTCGCAGCTGATGGTAACTGGCGGC
ATGTGCTGCGCTGTGCTCAGTCTTCTCTTTATTTATCCTCGTCTTAGTTCTGAAGGAGAGGTCGATATGATTGATATTGG
ACAGGGTGACAGCATGTATGTAGGTGCTCCGCATCAGCGGGGCCATGTCTTAATTGATACTGGCGGCACTTTGTCTTACT
TGTCAGAGCCTTGGCGGCAAAAACAGCACCCGTTTTCACTGGGAGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATTAAACAGCTTGATGCTTTAATTCTGACGCATGCTGACCAAGATCATATTGGAGAGGCGGAAACTCTGCTGAAGCATCA
TAAAGTGAAACGCCTCGTGATTCCGAAAGGGTTCGTGTCGGAACCTAAAGACGAAAAAGTGCTGCAGGCTGCCAGAGAGG
AGGGAGTCCCAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
ACACCTGATCCGGCAAGCAAAAATAATTCTTCTCTTGTTCTGTGGATGAAAACGGGCGGTGTGAGCTGGATCTTGACGGG
GGATCTGGAGAAAGAAGGGGAACAGGAGGTAATGAACGTGTTTCCGAATATCAAAGCGGACGTATTAAAGGTGGGGCACC
ATGGAAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACGGCCATTATCTCGGCGGGGGCAAAC
AATCGGTACCATCATCCCCATCAAGAAGTTCTGCAAATATTACAGAGACATTCCATCCGCGTGCTCCGCACCGATCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (22-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	88.66	100	0.887