Detailed information NTG0937397

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACET1D_RS27660
• Genome accession: NZ_CP168981
• Coordinates: 5398885..5399910 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTAK-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5393885..5404910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACET1D_RS27650 (ACET1D_27650)	rpmE	5396116..5396328 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACET1D_RS27655 (ACET1D_27655)	priA	5396531..5398729 (+)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
ACET1D_RS27660 (ACET1D_27660)	cytR	5398885..5399910 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACET1D_RS27665 (ACET1D_27665)	ftsN	5400002..5400961 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACET1D_RS27670 (ACET1D_27670)	hslV	5401054..5401584 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACET1D_RS27675 (ACET1D_27675)	hslU	5401594..5402925 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACET1D_RS27680 (ACET1D_27680)	menA	5402992..5403918 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACET1D_RS27685 (ACET1D_27685)	rraA	5404011..5404496 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACET1D_RS27690 (ACET1D_27690)	zapB	5404581..5404826 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=937397 ACET1D_RS27660 WP_000644904.1 5398885..5399910(+) (cytR) [Escherichia coli strain UTAK-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=937397 ACET1D_RS27660 WP_000644904.1 5398885..5399910(+) (cytR) [Escherichia coli strain UTAK-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628