Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | LLL8_RS11085 | Genome accession | NZ_AP025700 |
| Coordinates | 2245407..2245691 (-) | Length | 94 a.a. |
| NCBI ID | WP_025017139.1 | Uniprot ID | - |
| Organism | Lactococcus lactis strain L8 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2240407..2250691
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLL8_RS11055 (LLL8_21660) | - | 2240847..2241224 (-) | 378 | WP_033900715.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LLL8_RS11060 (LLL8_21670) | - | 2241429..2242295 (+) | 867 | WP_251899925.1 | RluA family pseudouridine synthase | - |
| LLL8_RS11065 (LLL8_21680) | - | 2242333..2243142 (-) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| LLL8_RS11070 (LLL8_21690) | - | 2243135..2243872 (-) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| LLL8_RS11075 (LLL8_21700) | - | 2244049..2244891 (-) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| LLL8_RS11080 (LLL8_21710) | - | 2244888..2245325 (-) | 438 | WP_201248645.1 | zinc-dependent MarR family transcriptional regulator | - |
| LLL8_RS11085 (LLL8_21720) | comGG | 2245407..2245691 (-) | 285 | WP_025017139.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| LLL8_RS11090 (LLL8_21730) | comGF | 2245730..2246176 (-) | 447 | WP_029344525.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LLL8_RS11095 (LLL8_21740) | comGE | 2246139..2246435 (-) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| LLL8_RS11100 (LLL8_21750) | comGD | 2246407..2246823 (-) | 417 | WP_032941843.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LLL8_RS11105 (LLL8_21760) | comGC | 2246798..2247067 (-) | 270 | WP_021721869.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LLL8_RS11110 (LLL8_21770) | - | 2247121..2248368 (-) | 1248 | WP_251899926.1 | Fic family protein | - |
| LLL8_RS11120 (LLL8_21780) | - | 2249061..2249840 (-) | 780 | WP_350028262.1 | peptidoglycan amidohydrolase family protein | - |
| LLL8_RS11125 (LLL8_21790) | - | 2249840..2250127 (-) | 288 | WP_251899928.1 | phage holin | - |
| LLL8_RS11130 (LLL8_21800) | - | 2250140..2250367 (-) | 228 | WP_251899929.1 | hemolysin XhlA family protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10813.05 Da Isoelectric Point: 5.0604
>NTDB_id=93709 LLL8_RS11085 WP_025017139.1 2245407..2245691(-) (comGG) [Lactococcus lactis strain L8]
MFSMFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDENTYQF
SIHLKDGTNFQIKK
MFSMFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDENTYQF
SIHLKDGTNFQIKK
Nucleotide
Download Length: 285 bp
>NTDB_id=93709 LLL8_RS11085 WP_025017139.1 2245407..2245691(-) (comGG) [Lactococcus lactis strain L8]
ATGTTTTCAATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACAGCTGAATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGGGATT
TGTCCTACAATTTACTGACAGACTCGTCAGCTAGTTCAAAAATTACTGACCATTCAAGTGATGAAAATACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAAATAA
ATGTTTTCAATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACAGCTGAATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGGGATT
TGTCCTACAATTTACTGACAGACTCGTCAGCTAGTTCAAAAATTACTGACCATTCAAGTGATGAAAATACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Lactococcus lactis subsp. cremoris KW2 |
58.511 |
100 |
0.585 |