Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | V5G11_RS02665 | Genome accession | NZ_CP145071 |
| Coordinates | 521808..522743 (+) | Length | 311 a.a. |
| NCBI ID | WP_010357463.1 | Uniprot ID | A0AB74EBP0 |
| Organism | Neisseria gonorrhoeae strain WHO_J_2024 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 516808..527743
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5G11_RS02640 (V5G11_02640) | - | 517308..517817 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| V5G11_RS02645 (V5G11_02645) | - | 518047..518628 (-) | 582 | WP_047923823.1 | superoxide dismutase | - |
| V5G11_RS02650 (V5G11_02650) | dnaB | 518792..520198 (+) | 1407 | WP_003704337.1 | replicative DNA helicase | - |
| V5G11_RS02655 (V5G11_02655) | pilH | 520506..521171 (+) | 666 | WP_353403740.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| V5G11_RS02660 (V5G11_02660) | pilI | 521203..521811 (+) | 609 | WP_263955095.1 | type IV pilus modification protein PilV | Machinery gene |
| V5G11_RS02665 (V5G11_02665) | pilJ | 521808..522743 (+) | 936 | WP_010357463.1 | PilW family protein | Machinery gene |
| V5G11_RS02670 (V5G11_02670) | pilK | 522722..523330 (+) | 609 | WP_003690900.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| V5G11_RS02675 (V5G11_02675) | pilL | 523332..523805 (+) | 474 | WP_353403742.1 | PilX family type IV pilin | Machinery gene |
| V5G11_RS02680 (V5G11_02680) | - | 523875..524183 (-) | 309 | WP_010951048.1 | AzlD family protein | - |
| V5G11_RS02685 (V5G11_02685) | - | 524180..524887 (-) | 708 | Protein_520 | AzlC family ABC transporter permease | - |
| V5G11_RS02690 (V5G11_02690) | dut | 525053..525505 (+) | 453 | WP_003687923.1 | dUTP diphosphatase | - |
| V5G11_RS02695 (V5G11_02695) | dapC | 525583..526770 (+) | 1188 | WP_353403649.1 | succinyldiaminopimelate transaminase | - |
| V5G11_RS02700 (V5G11_02700) | yaaA | 526926..527705 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 311 a.a. Molecular weight: 34216.91 Da Isoelectric Point: 8.9718
>NTDB_id=936842 V5G11_RS02665 WP_010357463.1 521808..522743(+) (pilJ) [Neisseria gonorrhoeae strain WHO_J_2024]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVFFGVTQKKPLFSLKRNSTNKLIPIAESPNIGYQGFTQRLNALIFQYGIDDANASAETTVVSSCGAISK
PGKQIPTLEDAKKELKIQDSDKEQNGNIARQRHVVNAYAVGRFGNNEEGLFRFQLDDKGEWGNPQLLAKKVKRMDVRYIY
VSGCPEDEDAGKEEQFKYTGKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVFFGVTQKKPLFSLKRNSTNKLIPIAESPNIGYQGFTQRLNALIFQYGIDDANASAETTVVSSCGAISK
PGKQIPTLEDAKKELKIQDSDKEQNGNIARQRHVVNAYAVGRFGNNEEGLFRFQLDDKGEWGNPQLLAKKVKRMDVRYIY
VSGCPEDEDAGKEEQFKYTGKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 936 bp
>NTDB_id=936842 V5G11_RS02665 WP_010357463.1 521808..522743(+) (pilJ) [Neisseria gonorrhoeae strain WHO_J_2024]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTTTTTTCGGTGTGACGCAAAAAAAACCTCTTTTTTCCTTAAAAAG
GAACAGTACAAATAAACTTATCCCCATAGCGGAATCTCCAAATATCGGATATCAGGGTTTTACCCAGCGCCTTAACGCAT
TGATTTTCCAATACGGAATCGATGATGCTAATGCAAGCGCCGAGACTACCGTCGTCAGCAGCTGTGGCGCAATATCGAAA
CCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGGATTCTGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCAATAATGAGGAAGGTTTGTTCCGCTTCC
AATTGGATGATAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTTAAACGTATGGATGTGCGGTATATCTAT
GTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGGTAAATTCGACAGCTCTGTTAC
GCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTT
ACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTTTTTTCGGTGTGACGCAAAAAAAACCTCTTTTTTCCTTAAAAAG
GAACAGTACAAATAAACTTATCCCCATAGCGGAATCTCCAAATATCGGATATCAGGGTTTTACCCAGCGCCTTAACGCAT
TGATTTTCCAATACGGAATCGATGATGCTAATGCAAGCGCCGAGACTACCGTCGTCAGCAGCTGTGGCGCAATATCGAAA
CCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGGATTCTGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCAATAATGAGGAAGGTTTGTTCCGCTTCC
AATTGGATGATAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTTAAACGTATGGATGTGCGGTATATCTAT
GTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGGTAAATTCGACAGCTCTGTTAC
GCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTT
ACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
89.49 |
100 |
0.904 |