Detailed information NTG0936748

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACEPM4_RS00345
• Genome accession: NZ_CP168733
• Coordinates: 77216..78421 (-)
• Length: 401 a.a.
• NCBI ID: WP_016722608.1
• Uniprot ID: A0ABX7ZX23
• Organism: Ralstonia pseudosolanacearum strain RUN5935
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 72216..83421

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEPM4_RS00330 (ACEPM4_00330)	-	72883..73821 (+)	939	WP_011000032.1	LysR family transcriptional regulator	-
ACEPM4_RS00335 (ACEPM4_00335)	-	73922..76555 (-)	2634	WP_071507632.1	DNA topoisomerase III	-
ACEPM4_RS00340 (ACEPM4_00340)	-	76786..77175 (-)	390	WP_011000034.1	thioredoxin family protein	-
ACEPM4_RS00345 (ACEPM4_00345)	dprA	77216..78421 (-)	1206	WP_016722608.1	DNA-processing protein DprA	Machinery gene
ACEPM4_RS00350 (ACEPM4_00350)	-	78439..79611 (-)	1173	WP_011000036.1	LysM peptidoglycan-binding domain-containing protein	-
ACEPM4_RS00355 (ACEPM4_00355)	def	79865..80374 (+)	510	WP_011000037.1	peptide deformylase	-
ACEPM4_RS00360 (ACEPM4_00360)	-	80422..82395 (+)	1974	WP_197345658.1	glycosyltransferase family 39 protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 41299.33 Da
• Isoelectric Point: 6.0524

>NTDB_id=936748 ACEPM4_RS00345 WP_016722608.1 77216..78421(-) (dprA) [Ralstonia pseudosolanacearum strain RUN5935]
MIDASQVAAPAATAPADPLDATRDPAELAAWLRLTETPGIGPVAARQLLAAFGLPQDIFRQSYAALAKVLPERQARALLA
EPDEALAALIERTAAWAAEPGNAIFTLADRGYPPRLLELPDPPTLLYAKGDVSLLRAAAVGVVGARSATAQGLENARAFA
QALSAANVTIVSGLALGIDAAAHDGALTGPGSTIAVVGTGLDMVYPARNRALAHRIAEAGLILSEYPLGMGARAENFPRR
NRLIAGLARGLLVVEAAAQSGSLITARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILDELGWSRTPTP
ATRTPRTAAQAPVPASAPAARPAATAAETALLDALGFDPVDLDTLCERTGQTAANLSAQLLALELAGHIERQPGGRFLRL
P

Nucleotide

• Length: 1206 bp

>NTDB_id=936748 ACEPM4_RS00345 WP_016722608.1 77216..78421(-) (dprA) [Ralstonia pseudosolanacearum strain RUN5935]
TTGATCGATGCCTCACAGGTCGCGGCGCCCGCCGCGACCGCTCCCGCCGATCCCCTCGACGCCACACGCGATCCCGCCGA
GCTGGCCGCTTGGCTGCGGCTGACGGAAACGCCGGGCATCGGCCCCGTCGCCGCGCGGCAACTGCTGGCCGCTTTCGGGC
TACCCCAGGACATCTTCCGTCAATCCTATGCGGCACTCGCCAAGGTGCTGCCTGAACGACAAGCGCGCGCGCTGCTGGCC
GAGCCGGACGAAGCGCTCGCCGCGCTGATCGAGCGGACTGCCGCCTGGGCCGCCGAACCGGGCAATGCCATCTTCACGCT
GGCCGACCGTGGCTACCCGCCCCGGCTGCTGGAACTCCCCGATCCGCCGACGCTGCTGTATGCCAAGGGCGATGTCTCGC
TGCTGCGGGCTGCGGCGGTGGGCGTGGTCGGCGCGCGCAGCGCCACCGCGCAGGGTCTGGAGAACGCCCGCGCCTTCGCG
CAGGCGCTGTCCGCCGCCAACGTGACGATCGTCTCGGGGCTGGCGCTGGGCATCGATGCCGCCGCACACGACGGCGCGCT
GACCGGGCCCGGCAGCACCATCGCGGTGGTCGGCACGGGGCTGGACATGGTCTACCCGGCCCGGAACCGAGCCCTGGCAC
ACCGCATCGCCGAAGCCGGGCTGATCCTGTCGGAGTACCCGCTCGGCATGGGGGCACGGGCCGAGAACTTCCCGCGCCGC
AACCGGCTGATCGCCGGGCTCGCGCGCGGACTGCTGGTGGTGGAGGCCGCCGCGCAATCCGGTTCGCTGATCACCGCCCG
GCTGGCCGCCGAGCAGGGGCGCGATGTGTTCGCCATTCCCGGCTCGATCCATTCGCCGCTGGCCAAGGGCTGCCACCTGC
TGATCAAGCAGGGTGCCAAGCTGGTCGAGACGGCGGCCGACATCCTGGACGAACTGGGCTGGAGCCGCACACCGACGCCA
GCGACACGGACACCGCGCACGGCCGCCCAGGCACCTGTCCCCGCATCCGCCCCGGCCGCACGTCCGGCGGCAACGGCCGC
GGAAACCGCGTTGCTCGATGCGCTCGGCTTCGACCCGGTCGACCTCGACACCCTGTGCGAACGCACCGGCCAAACCGCGG
CCAACCTGTCGGCACAACTGCTGGCGCTGGAGCTGGCAGGCCACATCGAGCGCCAACCGGGCGGACGCTTTCTGCGGCTG
CCATAG

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (101-303)

• DprA winged helix domain (WHD_DprA) (336-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria gonorrhoeae MS11	42.674	97.007	0.414
dprA	Neisseria gonorrhoeae strain FA1090	42.416	97.007	0.411
dprA	Neisseria meningitidis MC58	41.519	98.504	0.409
dprA	Neisseria meningitidis strain C311	41.519	98.504	0.409
dprA	Vibrio campbellii strain DS40M4	42.448	95.761	0.406
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	38.442	96.01	0.369
dprA	Vibrio cholerae strain A1552	38.442	96.01	0.369
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	37.859	95.511	0.362