Detailed information NTG0936477

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: V5F92_RS09445
• Genome accession: NZ_CP145050
• Coordinates: 1798212..1799465 (-)
• Length: 417 a.a.
• NCBI ID: WP_003687004.1
• Uniprot ID: A0AB74EGQ8
• Organism: Neisseria gonorrhoeae strain WHO_H_2024
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1793212..1804465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5F92_RS09420 (V5F92_09430)	lpxC	1793689..1794612 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
V5F92_RS09425 (V5F92_09435)	pilE	1794718..1795131 (+)	414	WP_047918892.1	pilin	Machinery gene
V5F92_RS09430 (V5F92_09440)	-	1796111..1796622 (+)	512	Protein_1835	pilin	-
V5F92_RS09435 (V5F92_09445)	-	1797116..1797943 (+)	828	WP_082298602.1	opacity family porin	-
V5F92_RS09440 (V5F92_09450)	-	1797957..1798127 (+)	171	WP_169301565.1	hypothetical protein	-
V5F92_RS09445 (V5F92_09455)	pilA	1798212..1799465 (-)	1254	WP_003687004.1	signal recognition particle-docking protein FtsY	Machinery gene
V5F92_RS09450 (V5F92_09460)	msrAB	1799611..1801179 (+)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
V5F92_RS09455 (V5F92_09465)	-	1801263..1801748 (-)	486	WP_003687001.1	CinA family protein	-
V5F92_RS09460 (V5F92_09470)	-	1801774..1802622 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
V5F92_RS09465 (V5F92_09475)	-	1802716..1803717 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44389.74 Da
• Isoelectric Point: 4.8123

>NTDB_id=936477 V5F92_RS09445 WP_003687004.1 1798212..1799465(-) (pilA) [Neisseria gonorrhoeae strain WHO_H_2024]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=936477 V5F92_RS09445 WP_003687004.1 1798212..1799465(-) (pilA) [Neisseria gonorrhoeae strain WHO_H_2024]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGTTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCAGCCGTTTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998