Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   V5F92_RS07080 Genome accession   NZ_CP145050
Coordinates   1345861..1346505 (+) Length   214 a.a.
NCBI ID   WP_003698856.1    Uniprot ID   A0AA44U6I4
Organism   Neisseria gonorrhoeae strain WHO_H_2024     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1340861..1351505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5F92_RS07060 (V5F92_07065) putP 1341045..1342571 (-) 1527 WP_003689473.1 sodium/proline symporter PutP -
  V5F92_RS07065 (V5F92_07070) - 1343059..1343379 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  V5F92_RS07070 (V5F92_07075) comM 1343393..1344889 (+) 1497 WP_012503875.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  V5F92_RS07075 (V5F92_07080) ftsN 1344995..1345858 (+) 864 WP_172616882.1 cell division protein FtsN -
  V5F92_RS07080 (V5F92_07085) dsbA1 1345861..1346505 (+) 645 WP_003698856.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  V5F92_RS07085 (V5F92_07090) - 1346538..1347359 (+) 822 WP_003689465.1 undecaprenyl-diphosphate phosphatase -
  V5F92_RS07100 (V5F92_07105) - 1347800..1349047 (-) 1248 WP_010951292.1 class I SAM-dependent methyltransferase -
  V5F92_RS07105 (V5F92_07110) mraZ 1349326..1349781 (+) 456 WP_003689463.1 division/cell wall cluster transcriptional repressor MraZ -
  V5F92_RS07110 (V5F92_07115) rsmH 1349778..1350734 (+) 957 WP_003689462.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  V5F92_RS07115 (V5F92_07120) ftsL 1350761..1351024 (+) 264 WP_003701583.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23973.05 Da        Isoelectric Point: 9.9225

>NTDB_id=936466 V5F92_RS07080 WP_003698856.1 1345861..1346505(+) (dsbA1) [Neisseria gonorrhoeae strain WHO_H_2024]
MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEH
VVWRPEMLGLARMAAAVKLSGLKYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQK
LTEQYGIDGTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=936466 V5F92_RS07080 WP_003698856.1 1345861..1346505(+) (dsbA1) [Neisseria gonorrhoeae strain WHO_H_2024]
ATGAAGTTTAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGCCGGGAAAAATTGAGGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATACTTATCTGCGGACGGAGCAC
GTGGTCTGGCGGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCGGGTTTGAAATATCAGGCAAA
CTCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGTTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTATCTC
AAAAAGGTTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGTCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACGGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGATGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(86-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

57.754

87.383

0.505
  dsbA2 Neisseria meningitidis MC58

53.226

86.916

0.463