Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | M2038_RS08080 | Genome accession | NZ_AP025693 |
| Coordinates | 1659280..1659579 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain JICS127 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1654280..1664579
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2038_RS08055 (JICS127ACC_1561) | gcvPA | 1655492..1656838 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| M2038_RS08060 (JICS127ACC_1562) | gcvT | 1656858..1657949 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| M2038_RS08065 (JICS127ACC_1563) | - | 1658108..1658632 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| M2038_RS08070 | - | 1658622..1658768 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| M2038_RS08075 (JICS127ACC_1564) | comGF | 1658865..1659362 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M2038_RS08080 (JICS127ACC_1565) | comGE | 1659280..1659579 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| M2038_RS08085 (JICS127ACC_1566) | comGD | 1659566..1660012 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M2038_RS08090 (JICS127ACC_1567) | comGC | 1659990..1660301 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M2038_RS08095 (JICS127ACC_1568) | comGB | 1660315..1661385 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M2038_RS08100 (JICS127ACC_1569) | comGA | 1661357..1662331 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M2038_RS08105 (JICS127ACC_1570) | - | 1662383..1663006 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| M2038_RS08110 (JICS127ACC_1571) | - | 1663003..1663332 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| M2038_RS08115 (JICS127ACC_1572) | - | 1663332..1664318 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| M2038_RS08120 | - | 1664315..1664518 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=93633 M2038_RS08080 WP_000844413.1 1659280..1659579(-) (comGE) [Staphylococcus aureus strain JICS127]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=93633 M2038_RS08080 WP_000844413.1 1659280..1659579(-) (comGE) [Staphylococcus aureus strain JICS127]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |