Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8954_RS03340 | Genome accession | NZ_AP028365 |
| Coordinates | 634723..635106 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10632 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 629723..640106
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8954_RS03320 (B10632_06520) | - | 629802..631736 (-) | 1935 | WP_317726228.1 | RNB domain-containing ribonuclease | - |
| R8954_RS03325 (B10632_06530) | ilvC | 631855..632877 (+) | 1023 | WP_283804171.1 | ketol-acid reductoisomerase | - |
| R8954_RS03330 (B10632_06540) | - | 632881..633963 (+) | 1083 | WP_061099770.1 | divergent polysaccharide deacetylase family protein | - |
| R8954_RS03335 (B10632_06550) | dprA | 633953..634726 (+) | 774 | WP_002867721.1 | DNA-processing protein DprA | Machinery gene |
| R8954_RS03340 (B10632_06560) | dprB | 634723..635106 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8954_RS03345 (B10632_06570) | - | 635135..635974 (+) | 840 | WP_011049748.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8954_RS03350 (B10632_06580) | msrA | 636150..636647 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8954_RS03355 (B10632_06590) | ppa | 636689..637207 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8954_RS03360 (B10632_06600) | adk | 637217..637795 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8954_RS03365 (B10632_06610) | aspS | 637792..639543 (-) | 1752 | WP_317726230.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93579 R8954_RS03340 WP_002852281.1 634723..635106(+) (dprB) [Campylobacter jejuni strain BCH-10632]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93579 R8954_RS03340 WP_002852281.1 634723..635106(+) (dprB) [Campylobacter jejuni strain BCH-10632]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |