Detailed information NTG0935382

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACD268_RS00575
• Genome accession: NZ_CP168299
• Coordinates: 87916..88809 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343890.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FC1
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 82916..93809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACD268_RS00535 (ACD268_00535)	-	83229..84398 (+)	1170	WP_373381845.1	pyridoxal phosphate-dependent aminotransferase	-
ACD268_RS00540 (ACD268_00540)	recO	84395..85165 (+)	771	WP_000616167.1	DNA repair protein RecO	Machinery gene
ACD268_RS00545 (ACD268_00545)	plsX	85162..86154 (+)	993	WP_330789310.1	phosphate acyltransferase PlsX	-
ACD268_RS00550 (ACD268_00550)	-	86160..86393 (+)	234	WP_000136447.1	acyl carrier protein	-
ACD268_RS00555 (ACD268_00555)	-	86430..86729 (+)	300	Protein_103	transposase family protein	-
ACD268_RS00560 (ACD268_00560)	blpU	86932..87162 (+)	231	WP_001093075.1	bacteriocin-like peptide BlpU	-
ACD268_RS00565 (ACD268_00565)	-	87165..87290 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
ACD268_RS00570 (ACD268_00570)	-	87701..87895 (+)	195	WP_000756776.1	hypothetical protein	-
ACD268_RS00575 (ACD268_00575)	comR	87916..88809 (+)	894	WP_000343890.1	XRE family transcriptional regulator	Regulator
ACD268_RS00580 (ACD268_00580)	-	89339..89635 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
ACD268_RS00585 (ACD268_00585)	-	89642..90778 (+)	1137	WP_000698828.1	hypothetical protein	-
ACD268_RS00590 (ACD268_00590)	-	90775..91257 (+)	483	WP_001232094.1	stage II sporulation protein M	-
ACD268_RS00595 (ACD268_00595)	-	91254..91850 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
ACD268_RS00600 (ACD268_00600)	-	91831..92322 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34561.02 Da
• Isoelectric Point: 4.6063

>NTDB_id=935382 ACD268_RS00575 WP_000343890.1 87916..88809(+) (comR) [Streptococcus pneumoniae strain FC1]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKDSLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=935382 ACD268_RS00575 WP_000343890.1 87916..88809(+) (comR) [Streptococcus pneumoniae strain FC1]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGATAGCCTAGTTCAGATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37