Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   V5G23_RS12240 Genome accession   NZ_CP144925
Coordinates   2433585..2435906 (+) Length   773 a.a.
NCBI ID   WP_026080865.1    Uniprot ID   A0AAP9USS4
Organism   Bacillus licheniformis strain CP13     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2428585..2440906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G23_RS12215 (V5G23_12215) - 2430072..2431292 (+) 1221 WP_003184864.1 HDOD domain-containing protein -
  V5G23_RS12220 (V5G23_12220) - 2431335..2431673 (-) 339 WP_003184862.1 hypothetical protein -
  V5G23_RS12225 (V5G23_12225) degQ 2432168..2432308 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  V5G23_RS12230 (V5G23_12230) - 2432497..2433366 (+) 870 WP_011198252.1 polyprenyl synthetase family protein -
  V5G23_RS12235 (V5G23_12235) comX 2433381..2433545 (+) 165 WP_011198251.1 competence pheromone ComX -
  V5G23_RS12240 (V5G23_12240) comP 2433585..2435906 (+) 2322 WP_026080865.1 ATP-binding protein Regulator
  V5G23_RS12245 (V5G23_12245) comA 2435993..2436631 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  V5G23_RS12250 (V5G23_12250) - 2436648..2437037 (+) 390 WP_003184847.1 hotdog fold thioesterase -
  V5G23_RS12255 (V5G23_12255) mnhG 2437077..2437451 (-) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  V5G23_RS12260 (V5G23_12260) - 2437435..2437719 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  V5G23_RS12265 (V5G23_12265) - 2437719..2438195 (-) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  V5G23_RS12270 (V5G23_12270) - 2438201..2439679 (-) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  V5G23_RS12275 (V5G23_12275) - 2439672..2440013 (-) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  V5G23_RS12280 (V5G23_12280) - 2440013..2440444 (-) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 773 a.a.        Molecular weight: 88433.46 Da        Isoelectric Point: 6.3438

>NTDB_id=935361 V5G23_RS12240 WP_026080865.1 2433585..2435906(+) (comP) [Bacillus licheniformis strain CP13]
MRVNYNKLSLIIILLSLSLVPYIIYVNLHSSYLGMTMQFNEKNEYQVFEIEKGSLAQSLGFKKGDVILEINGKSVEKLRA
DDGKLADELSDVKSMIVERDGEIGFVETGYELVSYESLFLFIIPMMFYLLSLFCVYFIIKSNKRLNSASAFILIVFLLVT
STAYSCSVGSAKGDSLSIYITMITFQFVPVLYLHYIYQYFKEKGKEFFNNKIFLFLYPVGLLNLLLEISGDNLQISYSSI
KLFNLVSFLVVTIIAFALIIYGVIKNKASEQAYFLRILVITNFVAFIPFLIFYVIPYVFIGDYIFPAMFVVPFLLIIPFS
LVYQFIATKIYDIEFLLGRFKYYGLLAILPSLTAVGVFTLTQELSNSLNTVKNTIFIYFIMLGVFYLKEILDFRFRLKRF
SEKFNYQDSVFKFTQLIRSSTSLAQVLRELSQTILDVLPVSQAYVLELKSDGTVGLLENNANDQVWKPYEKEAFRAITDI
GKIVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWL
NKLMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQL
LYDLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHY
EDDGIGVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2322 bp        

>NTDB_id=935361 V5G23_RS12240 WP_026080865.1 2433585..2435906(+) (comP) [Bacillus licheniformis strain CP13]
ATGCGTGTTAATTATAATAAACTATCTTTAATTATTATTTTGCTAAGCCTCTCCTTGGTTCCTTATATTATCTATGTAAA
TCTGCATTCTAGTTACCTTGGAATGACAATGCAATTTAATGAAAAAAACGAATACCAAGTATTCGAGATTGAAAAAGGGT
CACTGGCTCAATCCCTAGGATTTAAAAAAGGGGATGTTATTCTAGAGATAAATGGTAAAAGTGTAGAAAAATTAAGGGCT
GATGATGGGAAATTAGCTGATGAATTAAGTGATGTTAAATCGATGATCGTTGAAAGAGATGGAGAGATAGGGTTTGTAGA
GACCGGATATGAATTGGTGAGTTATGAAAGTCTATTTCTATTTATTATTCCAATGATGTTTTATCTCCTTTCTCTTTTTT
GTGTTTATTTCATAATAAAATCAAACAAAAGATTAAATTCGGCTTCAGCTTTTATTTTAATTGTTTTTCTGCTTGTTACA
TCAACAGCTTATTCTTGTTCTGTGGGATCTGCAAAGGGAGATAGTTTAAGTATCTATATAACAATGATAACTTTTCAATT
CGTTCCTGTTTTGTATCTCCACTATATTTATCAATATTTCAAGGAAAAAGGAAAAGAGTTTTTCAATAATAAAATATTTC
TTTTCCTATACCCTGTGGGTTTATTGAATTTGCTATTGGAAATTTCCGGTGATAATTTGCAGATTTCTTATAGTTCCATT
AAGCTCTTTAACCTGGTATCTTTCTTGGTTGTTACCATTATAGCCTTTGCTCTTATCATTTATGGTGTAATAAAAAATAA
AGCTTCTGAGCAAGCCTATTTTTTAAGGATACTTGTTATCACAAATTTTGTTGCGTTTATTCCGTTCTTAATTTTCTATG
TCATTCCATATGTATTTATCGGTGATTATATATTCCCGGCAATGTTTGTTGTACCCTTTTTGTTGATTATTCCTTTCTCA
TTAGTGTATCAATTTATTGCTACCAAAATATATGACATTGAATTCTTATTGGGACGTTTTAAATACTATGGATTGTTAGC
CATTTTACCAAGCTTGACAGCTGTAGGTGTATTTACTTTAACACAAGAATTAAGTAATAGTCTAAATACAGTTAAAAACA
CTATATTTATCTATTTTATTATGCTAGGTGTTTTTTATCTCAAAGAAATTCTTGATTTTCGTTTCCGTTTAAAAAGGTTT
TCTGAAAAATTTAATTACCAAGATAGTGTATTTAAGTTTACCCAACTTATACGGAGCTCGACATCGTTAGCGCAAGTGCT
AAGGGAATTGTCTCAAACGATTCTTGATGTTTTACCTGTCAGCCAGGCTTATGTACTGGAGTTAAAGAGTGATGGAACCG
TAGGGTTACTTGAAAATAATGCAAACGATCAAGTTTGGAAGCCTTATGAAAAAGAAGCTTTTAGGGCTATCACCGACATC
GGCAAAATCGTCGAAGTCGACCGTGGGTTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTT
GTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCC
TGGAAAACGTGCTGAAAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTG
AATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATAT
GATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAA
GGCTCATCAATATGAATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTG
TTGTACGATCTCGGACTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCG
CCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAA
GCAATGCGGTTAAACATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTAT
GAAGATGACGGCATTGGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCG
CGTCCGCGCACTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.202

99.871

0.521