Detailed information NTG0935352

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V5G23_RS10375
• Genome accession: NZ_CP144925
• Coordinates: 2073710..2074867 (+)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain CP13
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2068710..2079867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G23_RS10350 (V5G23_10350)	-	2068812..2069993 (+)	1182	WP_011198354.1	glycosyltransferase family 1 protein	-
V5G23_RS10355 (V5G23_10355)	-	2070124..2071188 (+)	1065	WP_003185739.1	MraY family glycosyltransferase	-
V5G23_RS10360 (V5G23_10360)	-	2071308..2071682 (+)	375	WP_003185738.1	hypothetical protein	-
V5G23_RS10365 (V5G23_10365)	-	2071767..2072843 (-)	1077	WP_003185737.1	LCP family protein	-
V5G23_RS10370 (V5G23_10370)	-	2072858..2073496 (-)	639	WP_003185736.1	YigZ family protein	-
V5G23_RS10375 (V5G23_10375)	degS	2073710..2074867 (+)	1158	WP_003185733.1	histidine kinase	Regulator
V5G23_RS10380 (V5G23_10380)	degU	2074949..2075638 (+)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
V5G23_RS10385 (V5G23_10385)	-	2075758..2076600 (+)	843	WP_003185726.1	DegV family protein	-
V5G23_RS10390 (V5G23_10390)	comFA	2076721..2078115 (+)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
V5G23_RS10395 (V5G23_10395)	-	2078170..2078454 (+)	285	WP_003185718.1	competence protein ComFB	-
V5G23_RS10400 (V5G23_10400)	comFC	2078411..2079145 (+)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
V5G23_RS10405 (V5G23_10405)	-	2079204..2079623 (+)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=935352 V5G23_RS10375 WP_003185733.1 2073710..2074867(+) (degS) [Bacillus licheniformis strain CP13]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=935352 V5G23_RS10375 WP_003185733.1 2073710..2074867(+) (degS) [Bacillus licheniformis strain CP13]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894