Detailed information NTG0935355

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAH689_RS16090
• Genome accession: NZ_CP168269
• Coordinates: 3312168..3313193 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain IH5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3307168..3318193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAH689_RS16060 (AAH689_16060)	zapB	3307252..3307497 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AAH689_RS16065 (AAH689_16065)	rraA	3307582..3308067 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AAH689_RS16070 (AAH689_16070)	menA	3308160..3309086 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAH689_RS16075 (AAH689_16075)	hslU	3309153..3310484 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AAH689_RS16080 (AAH689_16080)	hslV	3310494..3311024 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AAH689_RS16085 (AAH689_16085)	ftsN	3311117..3312076 (-)	960	WP_000068828.1	cell division protein FtsN	-
AAH689_RS16090 (AAH689_16090)	cytR	3312168..3313193 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AAH689_RS16095 (AAH689_16095)	priA	3313349..3315547 (-)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AAH689_RS16100 (AAH689_16100)	rpmE	3315750..3315962 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AAH689_RS16105 (AAH689_16105)	yiiX	3316023..3316631 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AAH689_RS16110 (AAH689_16110)	metJ	3316815..3317132 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=935355 AAH689_RS16090 WP_000644904.1 3312168..3313193(-) (cytR) [Escherichia coli strain IH5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=935355 AAH689_RS16090 WP_000644904.1 3312168..3313193(-) (cytR) [Escherichia coli strain IH5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628