Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   VQP54_RS01800 Genome accession   NZ_CP144682
Coordinates   369688..370116 (-) Length   142 a.a.
NCBI ID   WP_338489079.1    Uniprot ID   -
Organism   Ruoffia tabacinasalis strain jzb001     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 364688..375116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VQP54_RS01795 (VQP54_01795) rseP 368852..369646 (-) 795 WP_338489077.1 RIP metalloprotease RseP -
  VQP54_RS01800 (VQP54_01800) eeP 369688..370116 (-) 429 WP_338489079.1 site-2 protease family protein Regulator
  VQP54_RS01805 (VQP54_01805) - 370128..370922 (-) 795 WP_338489082.1 phosphatidate cytidylyltransferase -
  VQP54_RS01810 (VQP54_01810) - 370960..371682 (-) 723 WP_338489085.1 isoprenyl transferase -
  VQP54_RS01815 (VQP54_01815) frr 371858..372418 (-) 561 WP_338489086.1 ribosome recycling factor -
  VQP54_RS01820 (VQP54_01820) pyrH 372566..373306 (-) 741 WP_338489088.1 UMP kinase -
  VQP54_RS01825 (VQP54_01825) tsf 373380..374264 (-) 885 WP_338489090.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15814.33 Da        Isoelectric Point: 4.3857

>NTDB_id=934378 VQP54_RS01800 WP_338489079.1 369688..370116(-) (eeP) [Ruoffia tabacinasalis strain jzb001]
MTTLLVFLVIFSIIVVIHEFGHYFFAKRAGILVREFALGMGPKLFSKQGKDGTTYTVRLLPLGGYVRLAGLYEEDEIQAG
MEVGLEINDNDQVSLINLSDNFSVDEMPVRVDNVDLIDEMIIEAVPVGQTDIVKYSVAKKQT

Nucleotide


Download         Length: 429 bp        

>NTDB_id=934378 VQP54_RS01800 WP_338489079.1 369688..370116(-) (eeP) [Ruoffia tabacinasalis strain jzb001]
TTGACGACTTTACTAGTATTTTTAGTCATATTTTCGATAATTGTAGTTATACATGAGTTTGGACACTATTTTTTCGCAAA
GCGTGCAGGAATTTTAGTTAGAGAATTTGCGTTAGGGATGGGTCCTAAATTATTTTCTAAACAAGGGAAAGATGGAACAA
CATATACAGTCAGATTGTTACCACTTGGTGGTTACGTTCGTCTAGCTGGATTATATGAAGAAGATGAAATTCAAGCTGGA
ATGGAAGTAGGTTTAGAAATTAATGATAATGATCAAGTATCATTGATTAATTTATCGGATAACTTTTCAGTTGACGAGAT
GCCAGTCAGAGTTGACAATGTTGATTTAATTGATGAGATGATCATTGAAGCCGTTCCTGTAGGTCAAACGGATATTGTAA
AATACTCAGTGGCAAAAAAGCAAACATAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

53.383

93.662

0.5
  eeP Streptococcus thermophilus LMD-9

53.383

93.662

0.5