Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACCK16_RS06000 Genome accession   NZ_CP168089
Coordinates   1240090..1241376 (+) Length   428 a.a.
NCBI ID   WP_000121123.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CUBIST-23     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1235090..1246376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCK16_RS05970 (ACCK16_05970) - 1235486..1235599 (+) 114 WP_001789890.1 hypothetical protein -
  ACCK16_RS05975 (ACCK16_05975) tsf 1235634..1236515 (+) 882 WP_000201387.1 translation elongation factor Ts -
  ACCK16_RS05980 (ACCK16_05980) pyrH 1236652..1237374 (+) 723 WP_000057330.1 UMP kinase -
  ACCK16_RS05985 (ACCK16_05985) frr 1237393..1237947 (+) 555 WP_001280003.1 ribosome recycling factor -
  ACCK16_RS05990 (ACCK16_05990) - 1238319..1239089 (+) 771 WP_000473705.1 isoprenyl transferase -
  ACCK16_RS05995 (ACCK16_05995) - 1239096..1239878 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  ACCK16_RS06000 (ACCK16_06000) eeP 1240090..1241376 (+) 1287 WP_000121123.1 RIP metalloprotease RseP Regulator
  ACCK16_RS06005 (ACCK16_06005) - 1241396..1243099 (+) 1704 WP_000814090.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48134.53 Da        Isoelectric Point: 9.6293

>NTDB_id=934339 ACCK16_RS06000 WP_000121123.1 1240090..1241376(+) (eeP) [Staphylococcus aureus strain CUBIST-23]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERNGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=934339 ACCK16_RS06000 WP_000121123.1 1240090..1241376(+) (eeP) [Staphylococcus aureus strain CUBIST-23]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACCGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCGAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGACGACTTATTCATAGAAGGTATTACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAGTTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCAGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCTTATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTAATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTTAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACGTA
CGCTCTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

40.046

100

0.404

  eeP Streptococcus thermophilus LMD-9

39.815

100

0.402