Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   V4S29_RS05075 Genome accession   NZ_CP144498
Coordinates   979477..980745 (+) Length   422 a.a.
NCBI ID   WP_171300912.1    Uniprot ID   -
Organism   Enterococcus cecorum strain 66     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 974477..985745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V4S29_RS05055 (V4S29_05060) - 975311..977014 (+) 1704 WP_347906795.1 hypothetical protein -
  V4S29_RS05060 (V4S29_05065) - 977154..977951 (+) 798 WP_047242474.1 isoprenyl transferase -
  V4S29_RS05065 (V4S29_05070) - 977952..978758 (+) 807 WP_047341149.1 phosphatidate cytidylyltransferase -
  V4S29_RS05070 (V4S29_05075) - 978913..979344 (+) 432 WP_347907143.1 DUF234 domain-containing protein -
  V4S29_RS05075 (V4S29_05080) eeP 979477..980745 (+) 1269 WP_171300912.1 RIP metalloprotease RseP Regulator
  V4S29_RS05080 (V4S29_05085) - 980762..982357 (+) 1596 WP_171315415.1 His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46525.33 Da        Isoelectric Point: 5.5006

>NTDB_id=934110 V4S29_RS05075 WP_171300912.1 979477..980745(+) (eeP) [Enterococcus cecorum strain 66]
MKSILVFLIIFSVIVIVHEFGHFYFARKSGILVREFSIGMGPKVFAKQGKDGVAYTIRLLPLGGYVRMAGADEGGDLTPG
MFISLVVDENNVVHKMNCCEKVELENSIPFEVADSDLEDELYVEGYVNGEDSKLVRFAVDHDATVIESDGTEIRIAPRDV
QFQSAKLWQRMLTNFAGPLNNFILTFVLCVILVFMQGGMSDPNTSKLGEIMPDSPASQAGLKQGDEIKTIANKKISNWND
LVDEIQKNPGKSLEVKYTRDGQTKTTTLTPKTVTVNDEKVGQIGITMYKKTGVMTMITGGFEVSINMATQIFQALKSIIV
QPDINKLGGPVAIFQQSAQVANEGLVTIIAYMALISVNIGIFNLLPIPALDGGKLVLNILEAIRRKPLKPEHEGIITMIG
VGMILLLFVLVTWNDIQRMFFR

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=934110 V4S29_RS05075 WP_171300912.1 979477..980745(+) (eeP) [Enterococcus cecorum strain 66]
ATGAAATCGATTCTAGTTTTTTTGATTATCTTTTCAGTCATTGTCATTGTTCATGAGTTTGGACATTTTTATTTTGCACG
TAAATCTGGTATTTTAGTGCGTGAATTTTCTATCGGAATGGGGCCTAAAGTCTTTGCTAAACAAGGAAAAGATGGAGTTG
CCTATACGATTCGCTTACTTCCATTAGGCGGCTATGTGCGAATGGCCGGTGCGGATGAAGGTGGCGATTTAACACCAGGG
ATGTTTATTTCATTAGTAGTAGATGAAAATAATGTGGTGCACAAGATGAATTGCTGCGAAAAAGTAGAATTGGAAAATAG
TATTCCTTTTGAGGTCGCCGATAGTGATTTAGAAGATGAACTTTATGTGGAAGGCTATGTCAATGGAGAGGATAGCAAGC
TTGTGCGTTTTGCCGTCGATCATGATGCAACGGTGATTGAATCTGATGGTACGGAAATTCGCATCGCACCACGAGATGTA
CAATTCCAGTCAGCTAAATTATGGCAACGTATGCTTACCAATTTTGCTGGTCCGTTAAATAATTTCATCTTAACTTTTGT
ATTGTGTGTGATTTTGGTCTTTATGCAAGGTGGGATGAGTGATCCTAATACTTCAAAATTAGGTGAGATTATGCCTGATT
CACCTGCTAGTCAAGCTGGATTGAAACAAGGCGATGAAATCAAAACGATTGCTAACAAGAAAATCAGCAACTGGAATGAT
TTGGTAGATGAAATTCAAAAAAATCCAGGGAAATCGCTTGAAGTCAAATATACACGTGATGGTCAAACCAAAACCACGAC
CTTAACACCTAAAACTGTGACGGTCAATGATGAAAAAGTGGGTCAAATTGGGATCACCATGTATAAGAAAACTGGTGTGA
TGACAATGATTACAGGTGGTTTTGAAGTGTCGATAAATATGGCCACTCAGATTTTCCAAGCTTTGAAATCAATTATTGTC
CAGCCTGATATTAATAAGTTAGGTGGTCCAGTAGCGATTTTCCAACAGTCTGCGCAGGTAGCTAATGAAGGTCTCGTTAC
GATTATTGCGTACATGGCTTTGATTTCGGTGAATATTGGGATTTTTAATTTACTCCCAATTCCAGCCTTAGATGGTGGCA
AACTCGTCTTAAATATTTTAGAAGCCATTCGTCGCAAACCCTTAAAGCCAGAACACGAAGGTATTATTACCATGATTGGT
GTAGGGATGATTTTATTACTCTTTGTTTTAGTCACTTGGAATGATATTCAAAGGATGTTTTTTAGATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(209-268)

Peptidase family M50 (Peptidase_M50)

(7-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.372

100

0.493
  eeP Streptococcus thermophilus LMG 18311

48.131

100

0.488