Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   V4S27_RS06990 Genome accession   NZ_CP144495
Coordinates   1387514..1388782 (-) Length   422 a.a.
NCBI ID   WP_047334471.1    Uniprot ID   -
Organism   Enterococcus cecorum strain 70     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1382514..1393782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V4S27_RS06985 (V4S27_06985) - 1385902..1387497 (-) 1596 WP_047334454.1 His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein -
  V4S27_RS06990 (V4S27_06990) eeP 1387514..1388782 (-) 1269 WP_047334471.1 RIP metalloprotease RseP Regulator
  V4S27_RS06995 (V4S27_06995) - 1388915..1389385 (-) 471 WP_231482492.1 DUF234 domain-containing protein -
  V4S27_RS07000 (V4S27_07000) - 1389501..1390307 (-) 807 WP_016252406.1 phosphatidate cytidylyltransferase -
  V4S27_RS07005 (V4S27_07005) - 1390308..1391105 (-) 798 WP_047338585.1 isoprenyl transferase -
  V4S27_RS07010 (V4S27_07010) - 1391245..1392678 (-) 1434 WP_235426828.1 LTA synthase family protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46526.36 Da        Isoelectric Point: 5.5062

>NTDB_id=934075 V4S27_RS06990 WP_047334471.1 1387514..1388782(-) (eeP) [Enterococcus cecorum strain 70]
MKSILVFLIIFSVIVIVHEFGHFYFARKSGILVREFSIGMGPKVFAKQGKDGVAYTIRLLPLGGYVRMAGADEGGDLTPG
MFISLVVDENNVVHKMNCCEKVELENSIPFEVADSDLEDELYVEGYVNGEDSKLVRFAVDHDATVIESDGTEIRIAPRDV
QFQSAKLWQRMLTNFAGPLNNFILTFVLCVILVFMQGGMSDPNTSKLGEIMPDSPASQAGLKQGDEIKTIADKKISNWND
LVDEIQKNPGKSLEVKYTRDGQTKTTTLTPKTVTVNDEKVGQIGITMYKKTGVMTMITGGFEVSINMATQIFKALKSIIV
QPDINKLGGPVAIFQQSAQVANEGLVTIIAYMALISVNIGIFNLLPIPALDGGKLVLNILEAIRRKPLKPEHEGIITMIG
VGMILLLFVLVTWNDIQRMFFR

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=934075 V4S27_RS06990 WP_047334471.1 1387514..1388782(-) (eeP) [Enterococcus cecorum strain 70]
ATGAAATCGATTCTAGTTTTTTTGATTATCTTTTCAGTCATTGTCATTGTTCATGAGTTTGGACATTTTTATTTTGCACG
TAAATCTGGTATTTTAGTGCGTGAATTTTCTATCGGAATGGGGCCTAAAGTCTTTGCTAAACAAGGAAAAGATGGGGTTG
CCTATACGATTCGCTTACTTCCATTAGGCGGCTATGTGCGAATGGCCGGTGCGGATGAAGGTGGCGATTTAACACCAGGG
ATGTTTATTTCATTAGTAGTAGATGAAAATAATGTGGTGCACAAGATGAATTGCTGCGAAAAAGTGGAATTGGAAAATAG
TATTCCTTTTGAGGTTGCCGATAGTGATTTAGAAGATGAACTTTATGTAGAAGGCTATGTCAATGGAGAGGATAGCAAGC
TTGTGCGTTTTGCCGTCGATCATGATGCAACGGTGATTGAATCTGATGGTACGGAGATTCGCATCGCACCACGAGATGTA
CAATTCCAGTCAGCTAAATTATGGCAACGTATGCTTACCAATTTTGCTGGTCCGTTAAATAATTTTATCTTAACTTTTGT
CTTGTGTGTGATTTTGGTCTTTATGCAAGGTGGGATGAGTGATCCTAATACTTCAAAATTAGGTGAGATTATGCCTGATT
CACCTGCTAGTCAAGCTGGATTGAAACAAGGCGATGAAATTAAAACGATTGCTGACAAGAAAATCAGCAATTGGAATGAT
TTGGTAGATGAAATTCAAAAAAATCCAGGGAAGTCGCTTGAAGTCAAATATACACGTGATGGTCAAACCAAAACAACAAC
CTTAACACCTAAAACTGTGACGGTCAATGATGAAAAAGTGGGTCAAATTGGGATCACCATGTATAAGAAAACTGGTGTGA
TGACAATGATTACAGGTGGTTTTGAAGTGTCGATAAATATGGCCACTCAGATTTTCAAAGCTTTGAAATCAATTATTGTC
CAGCCTGATATTAATAAGTTAGGTGGTCCAGTAGCGATTTTCCAACAGTCTGCGCAGGTAGCTAATGAAGGTCTCGTTAC
GATTATTGCGTACATGGCTTTGATTTCGGTGAATATTGGGATTTTTAATTTACTCCCAATTCCAGCCTTAGATGGTGGAA
AGCTCGTATTAAATATTTTAGAAGCGATTCGTCGCAAACCCTTAAAGCCAGAACACGAAGGTATTATTACCATGATTGGT
GTAGGGATGATTTTATTACTCTTTGTTTTAGTCACTTGGAATGATATTCAAAGGATGTTTTTTAGATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(209-268)

Peptidase family M50 (Peptidase_M50)

(7-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.372

100

0.493
  eeP Streptococcus thermophilus LMG 18311

48.131

100

0.488