Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NUH87_RS19150 Genome accession   NZ_CP144470
Coordinates   4229794..4230201 (+) Length   135 a.a.
NCBI ID   WP_040071472.1    Uniprot ID   A0A7Y7XIB5
Organism   Pseudomonas batumici strain Koz11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4224794..4235201
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUH87_RS19120 (NUH87_19120) - 4224959..4225963 (-) 1005 WP_040071479.1 aspartate carbamoyltransferase catalytic subunit -
  NUH87_RS19125 (NUH87_19125) pyrR 4225976..4226482 (-) 507 WP_040071478.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NUH87_RS19130 (NUH87_19130) ruvX 4226550..4226990 (-) 441 WP_040071477.1 Holliday junction resolvase RuvX -
  NUH87_RS19135 (NUH87_19135) - 4226990..4227559 (-) 570 WP_040071475.1 YqgE/AlgH family protein -
  NUH87_RS19140 (NUH87_19140) - 4227612..4228511 (-) 900 WP_338522280.1 energy transducer TonB -
  NUH87_RS19145 (NUH87_19145) gshB 4228589..4229542 (-) 954 WP_338522281.1 glutathione synthase -
  NUH87_RS19150 (NUH87_19150) pilG 4229794..4230201 (+) 408 WP_040071472.1 twitching motility response regulator PilG Regulator
  NUH87_RS19155 (NUH87_19155) pilH 4230247..4230612 (+) 366 WP_040071471.1 twitching motility response regulator PilH -
  NUH87_RS19160 (NUH87_19160) - 4230625..4231176 (+) 552 WP_338522282.1 chemotaxis protein CheW -
  NUH87_RS19165 (NUH87_19165) - 4231180..4233237 (+) 2058 WP_338522283.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.32 Da        Isoelectric Point: 7.9717

>NTDB_id=933993 NUH87_RS19150 WP_040071472.1 4229794..4230201(+) (pilG) [Pseudomonas batumici strain Koz11]
MEQHSTALKVMVIDDSKTIRRTAETLLKHVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNHRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLAAIKAHVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=933993 NUH87_RS19150 WP_040071472.1 4229794..4230201(+) (pilG) [Pseudomonas batumici strain Koz11]
ATGGAACAGCATTCCACAGCCTTGAAAGTGATGGTCATCGACGACTCCAAGACGATTCGTCGAACCGCCGAGACGCTGCT
GAAACACGTGGGTTGCGAGGTGATCACGGCCATCGACGGCTTCGATGCGCTGGCCAAGATCGCCGATCATCATCCGGGTA
TCATCTTCGTCGATATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGATCAAGAACCATCGTGCGTTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGCCGTATCGTCGGTTCCGATCAGTT
TTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGCCGCGATCAAGGCCCATGTGCCGGGGTTCGCGGCGGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y7XIB5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

41.27

93.333

0.385