Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VUG52_RS24925 Genome accession   NZ_CP144367
Coordinates   5471763..5472164 (-) Length   133 a.a.
NCBI ID   WP_186715946.1    Uniprot ID   -
Organism   Pseudomonas sp. LH21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5466763..5477164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VUG52_RS24910 (VUG52_24910) - 5468711..5470735 (-) 2025 WP_156329677.1 methyl-accepting chemotaxis protein -
  VUG52_RS24915 (VUG52_24915) - 5470799..5471353 (-) 555 WP_050707242.1 chemotaxis protein CheW -
  VUG52_RS24920 (VUG52_24920) pilH 5471350..5471715 (-) 366 WP_028688352.1 twitching motility response regulator PilH -
  VUG52_RS24925 (VUG52_24925) pilG 5471763..5472164 (-) 402 WP_186715946.1 twitching motility response regulator PilG Regulator
  VUG52_RS24930 (VUG52_24930) gshB 5472350..5473303 (+) 954 WP_050707244.1 glutathione synthase -
  VUG52_RS24935 (VUG52_24935) - 5473394..5474293 (+) 900 WP_186733323.1 energy transducer TonB -
  VUG52_RS24940 (VUG52_24940) - 5474493..5475062 (+) 570 WP_331832211.1 YqgE/AlgH family protein -
  VUG52_RS24945 (VUG52_24945) ruvX 5475062..5475487 (+) 426 WP_262951296.1 Holliday junction resolvase RuvX -
  VUG52_RS24950 (VUG52_24950) pyrR 5475539..5476057 (+) 519 WP_050707247.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  VUG52_RS24955 (VUG52_24955) - 5476070..5477074 (+) 1005 WP_050707248.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14642.98 Da        Isoelectric Point: 6.4557

>NTDB_id=933822 VUG52_RS24925 WP_186715946.1 5471763..5472164(-) (pilG) [Pseudomonas sp. LH21]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPRIIFVDVLMPRLDGYQTCAIIKHNNAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRACVPGFAAQDPNAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=933822 VUG52_RS24925 WP_186715946.1 5471763..5472164(-) (pilG) [Pseudomonas sp. LH21]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
CGGCTGCGAGGTGATCACCGCCAGTGACGGCTTCGACGCCCTGGCCAAGATCGTCGACCACAAGCCCCGGATCATCTTCG
TCGATGTGCTGATGCCGCGCCTTGACGGTTACCAGACCTGCGCCATCATCAAGCACAACAACGCATTCAAGGACACCCCG
GTGATCCTGCTCTCTTCACGCGATGGCCTTTTTGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGTGCCTGCGTGCCCGGTTTCGCCGCGCAGGACCCAAACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.033

91.729

0.624