Detailed information NTG0933720

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V3829_RS06335
• Genome accession: NZ_CP144358
• Coordinates: 1243291..1244454 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain DJ4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1238291..1249454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3829_RS06305	-	1238555..1238974 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
V3829_RS06310	comFC	1239049..1239738 (-)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
V3829_RS06315	-	1239744..1240028 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
V3829_RS06320	comFA	1240086..1241471 (-)	1386	WP_046560106.1	DEAD/DEAH box helicase	Machinery gene
V3829_RS06325	-	1241579..1242427 (-)	849	WP_044052857.1	DegV family protein	-
V3829_RS06330	degU	1242525..1243214 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
V3829_RS06335	degS	1243291..1244454 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
V3829_RS06340	-	1244676..1245323 (+)	648	WP_003151384.1	YigZ family protein	-
V3829_RS06345	-	1245328..1246542 (+)	1215	WP_003151383.1	LCP family protein	-
V3829_RS06350	-	1246632..1247708 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
V3829_RS06355	tuaH	1247841..1249037 (-)	1197	WP_079004918.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=933720 V3829_RS06335 WP_003151385.1 1243291..1244454(-) (degS) [Bacillus velezensis strain DJ4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=933720 V3829_RS06335 WP_003151385.1 1243291..1244454(-) (degS) [Bacillus velezensis strain DJ4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGTTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948