Detailed information NTG0933040

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: V3O07_RS08850
• Genome accession: NZ_CP144255
• Coordinates: 1850320..1851021 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain YFY3
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1845320..1856021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3O07_RS08815 (V3O07_08815)	kdsB	1845843..1846604 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
V3O07_RS08820 (V3O07_08820)	-	1846616..1847596 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
V3O07_RS08825 (V3O07_08825)	-	1847608..1847949 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
V3O07_RS08830 (V3O07_08830)	-	1847967..1848740 (+)	774	WP_000497298.1	TatD family hydrolase	-
V3O07_RS08835 (V3O07_08835)	-	1848778..1849386 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
V3O07_RS08840 (V3O07_08840)	-	1849396..1849950 (+)	555	WP_000841373.1	type II secretion system protein	-
V3O07_RS08845 (V3O07_08845)	xcpV	1849940..1850320 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
V3O07_RS08850 (V3O07_08850)	xcpW	1850320..1851021 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
V3O07_RS08855 (V3O07_08855)	gspK	1851021..1851980 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
V3O07_RS08860 (V3O07_08860)	-	1852211..1852807 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
V3O07_RS08865 (V3O07_08865)	ung	1852858..1853571 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
V3O07_RS08870 (V3O07_08870)	-	1853568..1854692 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
V3O07_RS08875 (V3O07_08875)	tadA	1854699..1855202 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
V3O07_RS08880 (V3O07_08880)	-	1855272..1855715 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=933040 V3O07_RS08850 WP_000594589.1 1850320..1851021(+) (xcpW) [Acinetobacter baumannii strain YFY3]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=933040 V3O07_RS08850 WP_000594589.1 1850320..1851021(+) (xcpW) [Acinetobacter baumannii strain YFY3]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996