Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ACB345_RS06475 Genome accession   NZ_CP167025
Coordinates   1310219..1311253 (-) Length   344 a.a.
NCBI ID   WP_031577431.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1305219..1316253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB345_RS06440 (ACB345_06440) - 1305995..1306297 (-) 303 WP_011285079.1 YlxQ-related RNA-binding protein -
  ACB345_RS06445 (ACB345_06445) rnpM 1306290..1306586 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ACB345_RS06450 (ACB345_06450) nusA 1306602..1307759 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  ACB345_RS06455 (ACB345_06455) rimP 1307934..1308470 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ACB345_RS06465 (ACB345_06465) trmB 1308729..1309364 (-) 636 WP_031488472.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB345_RS06470 (ACB345_06470) ccrZ 1309364..1310155 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB345_RS06475 (ACB345_06475) pptB 1310219..1311253 (-) 1035 WP_031577431.1 ABC transporter permease Regulator
  ACB345_RS06480 (ACB345_06480) pptA 1311256..1311981 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB345_RS06485 (ACB345_06485) - 1312053..1312472 (+) 420 WP_002983376.1 HIT family protein -
  ACB345_RS06490 (ACB345_06490) - 1312469..1312825 (+) 357 WP_031488470.1 hypothetical protein -
  ACB345_RS06495 (ACB345_06495) - 1312936..1314219 (-) 1284 WP_031488469.1 LCP family protein -
  ACB345_RS06500 (ACB345_06500) - 1314228..1314752 (-) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  ACB345_RS06505 (ACB345_06505) tsaE 1314727..1315188 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40256.54 Da        Isoelectric Point: 10.3713

>NTDB_id=931884 ACB345_RS06475 WP_031577431.1 1310219..1311253(-) (pptB) [Streptococcus pyogenes strain Isolate]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISIKVKERAYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=931884 ACB345_RS06475 WP_031577431.1 1310219..1311253(-) (pptB) [Streptococcus pyogenes strain Isolate]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTATAAAAGTGAAAGAAAGAGCTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCCAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

43.023

100

0.43
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43