Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ACB339_RS07955 Genome accession   NZ_CP167023
Coordinates   1495496..1496530 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain Isolate 3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490496..1501530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB339_RS07920 (ACB339_07915) - 1491272..1491574 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ACB339_RS07925 (ACB339_07920) rnpM 1491567..1491863 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ACB339_RS07930 (ACB339_07925) nusA 1491879..1493036 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  ACB339_RS07935 (ACB339_07930) rimP 1493211..1493747 (-) 537 WP_011054929.1 ribosome maturation factor RimP -
  ACB339_RS07945 (ACB339_07940) trmB 1494006..1494641 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB339_RS07950 (ACB339_07945) ccrZ 1494641..1495432 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB339_RS07955 (ACB339_07950) pptB 1495496..1496530 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  ACB339_RS07960 (ACB339_07955) pptA 1496533..1497258 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB339_RS07965 (ACB339_07960) - 1497330..1497749 (+) 420 WP_002983376.1 HIT family protein -
  ACB339_RS07970 (ACB339_07965) - 1497746..1498102 (+) 357 WP_002988657.1 hypothetical protein -
  ACB339_RS07975 (ACB339_07970) - 1498213..1499496 (-) 1284 WP_002994335.1 LCP family protein -
  ACB339_RS07980 (ACB339_07975) - 1499505..1500029 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  ACB339_RS07985 (ACB339_07980) tsaE 1500004..1500465 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=931696 ACB339_RS07955 WP_010922583.1 1495496..1496530(-) (pptB) [Streptococcus pyogenes strain Isolate 3]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=931696 ACB339_RS07955 WP_010922583.1 1495496..1496530(-) (pptB) [Streptococcus pyogenes strain Isolate 3]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427